PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982848.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 772aa MW: 85571.1 Da PI: 7.0136

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.1e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_022982848.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MQTDLIVASN SETHLHSETF VAHVGDQGIA ASTPDHVIEP PPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHRLLKDRK KNVRKRLLQG ENCPPPVANG 180 VSNQSRALGH DGLAVKLVLV DTQNIPKLGP RKTVSKRNLN VGINRGNNGG YPTVLKPSRQ 240 RRKSGGVSSA AYKKWEKAAI AGVSLVADAA EHLERTVTDM DVLRDQTTLG KKNTDPAGSP 300 LLLLPSLQPN SLIDVASTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH 360 LSRKWGNSSA AHGELMLFPY SIQRKSLADC QRWAQDSFES AGDVYATIGR PQVFRLRYGW 420 CSNEEHGSVE LQTSVPAYCI QDDHVMDSRD IEGRIVDVAS IDAQPVNFNK NEVGTLSKNM 480 STPTAPSETE RSISARPNDD LPKSSNPALN MSWDKKNVAD TTIIQRSEDV DDLKSSNGTS 540 LSAGEWADSL TNISIGDLLS GVSQDVDANC VVTPLAEGTQ CLQQIPFSCD SFDAAIAAHI 600 SRQQYKTVSH PTLVPHASSI LDAEETCDAF SFQKNSVILQ DVSSSFTFSS ARGCKHIART 660 NSMGSSHMTE DLPRSECSPS EDHIQGDPKD EYQANPQILE TNNIDELADI YWPDSLGPLD 720 LDFPQTNKYH NEELILGDSL SSLNRLIASS LDAFQSCSFF GFDKKEPSAF NS

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MQTDLIVASN SETHLHSETF VAHVGDQGIA ASTPDHVIEP PPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHRLLKDRK KNVRKRLLQG ENCPPPVANG  180
VSNQSRALGH DGLAVKLVLV DTQNIPKLGP RKTVSKRNLN VGINRGNNGG YPTVLKPSRQ  240
RRKSGGVSSA AYKKWEKAAI AGVSLVADAA EHLERTVTDM DVLRDQTTLG KKNTDPAGSP  300
LLLLPSLQPN SLIDVASTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH  360
LSRKWGNSSA AHGELMLFPY SIQRKSLADC QRWAQDSFES AGDVYATIGR PQVFRLRYGW  420
CSNEEHGSVE LQTSVPAYCI QDDHVMDSRD IEGRIVDVAS IDAQPVNFNK NEVGTLSKNM  480
STPTAPSETE RSISARPNDD LPKSSNPALN MSWDKKNVAD TTIIQRSEDV DDLKSSNGTS  540
LSAGEWADSL TNISIGDLLS GVSQDVDANC VVTPLAEGTQ CLQQIPFSCD SFDAAIAAHI  600
SRQQYKTVSH PTLVPHASSI LDAEETCDAF SFQKNSVILQ DVSSSFTFSS ARGCKHIART  660
NSMGSSHMTE DLPRSECSPS EDHIQGDPKD EYQANPQILE TNNIDELADI YWPDSLGPLD  720
LDFPQTNKYH NEELILGDSL SSLNRLIASS LDAFQSCSFF GFDKKEPSAF NS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein