PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982209.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 574aa    MW: 64309 Da    PI: 8.7479
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3512.7e-1623108899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     s++l s rl lp kf++  g++   ++ ++l  +sg +W v l   ++ +  ++ +GW  F+++n L+ gDf+vF++dg+ +f  +++vf++
  XP_022982209.1  23 SSTLCSERLKLPLKFVRYLGEI--IGQSVSLIGPSGHTWLVDL--IQQNDNLFFCDGWPTFARDNSLECGDFLVFRYDGELNF--TLQVFDQ 108
                     6778899*********666877..5667***************..77777799999*********************996666..8888876 PP
2B344.23.5e-14220312398
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      ++++ +v  s  l +p +f  +h   + ++ +l+l +++g+sW v+     +   +++l +GW  Fv+ n+++ gD++vF+l+ + e   +v++
  XP_022982209.1 220 RIMKSFNVRGSYTLNIPYQFSMAHL--PSCKLKLVLHNLKGESWPVNSVPtIRVHTSHTLCGGWMAFVRGNDINMGDICVFELVLDCEL--RVRI 310
                     55666667777889******98995..458889**************954544445699999********************9875555..9999 PP

                     E- CS
              B3  97 fr 98 
                     fr
  XP_022982209.1 311 FR 312
                     98 PP
3B346.28.1e-15455542696
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     ++ +++ s  l +p +f + h  +  ++++++l+ ++g  W v+    + ++ ++++ +GW +Fv++ng++ gD+++F+l+g+ e   +v+v
  XP_022982209.1 455 KKFNTSGSYTLKIPHQFSSVHFPN--SKTEIILRGPNGGCWIVNSVPdSMGRMMHTFCGGWMSFVRDNGIQMGDICIFELVGKCEL--LVHV 542
                     455556667799******999633..5679***************6545555559999**********************995444..6655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    
MMETESCQLM VTSRRPCFYA FYSSTLCSER LKLPLKFVRY LGEIIGQSVS LIGPSGHTWL  60
VDLIQQNDNL FFCDGWPTFA RDNSLECGDF LVFRYDGELN FTLQVFDQSA CEKEDAFHSQ  120
CSQDNTGHKR DREEDPTCPD TCAEAVAKKM RSIFYVHSEC REGLAAIKTV EVHKNGAGQN  180
GISKVDDVTM QDKILALSLL SQDEKKISQS FSSNYPYFVR IMKSFNVRGS YTLNIPYQFS  240
MAHLPSCKLK LVLHNLKGES WPVNSVPTIR VHTSHTLCGG WMAFVRGNDI NMGDICVFEL  300
VLDCELRVRI FRVGKEISED QSRKGSLNQL DADHAKISRK TLKGLPKKMN GNSHKVHSKC  360
PKRIEVHDKK SSKSWQEPFC NDVRKHSSAK KVSTKVVVCS QSKKPSKRLV NQGTSVKGDL  420
VLPARLGLRA MLALDEERAA KSFASCFPTF VRIMKKFNTS GSYTLKIPHQ FSSVHFPNSK  480
TEIILRGPNG GCWIVNSVPD SMGRMMHTFC GGWMSFVRDN GIQMGDICIF ELVGKCELLV  540
HVTGVGKKGF NLSSEVATCS ELAIVPTTSN HPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-20B3 family protein