PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981991.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

LBD

Protein Properties

Length: 285aa MW: 31651 Da PI: 8.636

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	91.7	8.7e-29	81	181	1	96
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C++ Cvl+ + p++q +++ +++k+FG+s +l++++a+p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+ XP_022981991.1 81 SCNGCRVLRKGCSEACVLRSSLhwidsPEAQGNATLFLAKFFGRSDLLSFISAVPHHQRSALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQA 175 6********************************************************************************************** PP DUF260 91 kaelal 96 ++e++l XP_022981991.1 176 AVETVL 181 *99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MYVGTTGPTY FTKKSTVNTL TSNLTTVTFL TPTPFQILLN TLCFCFRFPT LHHLASSQPH 60 YRCLCFLIRI ACDFINNRRM SCNGCRVLRK GCSEACVLRS SLHWIDSPEA QGNATLFLAK 120 FFGRSDLLSF ISAVPHHQRS ALFQSLLFEA CGRTVNPVSG AVGLLSSGNW HVCQAAVETV 180 LRGGVPRENL GIEFSGNPTA ETESSLSLNT DVWTSTTQNI QLYPSSQFDS RRLSDLSLAT 240 GKGKTHPLEN RRSLDSEESV MTSFGSADHR DGDRRKERKL LNLFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	280	DRRKERKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37540.1	4e-59	LBD family protein