PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022981776.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 341aa    MW: 38442 Da    PI: 7.8384
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022981776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.15.6e-3144148199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++++ ++  l +ed+ g+sW+++++y+ +s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_022981776.1  44 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGlGHlGK 138
                     89***************************9555568889************************************************77688899 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +++++ ++r+
  XP_022981776.1 139 GRFFIDWRRR 148
                     999**99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDLGSCSRFP LHSSTDFEKE EEQQQQQQRE MESSSLFVEK EHMFDKVVTP SDVGKLNRLV  60
IPKQHAEKYF PLDSSSNDKG LLLNFEDRCG KSWRFRYSYW TSSQSYVMTK GWSRFVKEKR  120
LDAGDIVSFQ RGLGHLGKGR FFIDWRRRPP HAPFDTPITF HHNHHLHGGG AAGVAQIPHH  180
FHLHQWSPVA TPLSLPRDHL LHLPQNNSNH NNLTLFHNDN FNLYNHHYLN PPPIRDGGGS  240
PSVLYHLRSA PPPPPEAVGG GAGGIGKGAA PSKTLRLFGV NMECAVSEDQ SDDECDITTS  300
TTTMSPQFRI YDGMPMSIPI SMPNSNNKLT TDFFNKGKSS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.16e-63B3 family protein