PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022980688.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 278aa    MW: 30600.6 Da    PI: 9.8467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022980688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.37.5e-13556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT eE++ l+ +v+++G+g Wk I +        ++R+  ++k++w+++
   XP_022980688.1  5 KLKWTSEEEDALLAGVNKHGPGKWKNILKDPEfapslTHRSNIDLKDKWRNL 56
                     689***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGNQKLKWTS EEEDALLAGV NKHGPGKWKN ILKDPEFAPS LTHRSNIDLK DKWRNLSVST  60
ASQGSKEKSR APKAKAIVAA ISNHQNSAPA KFNASADTAG DDTPNNSTQD GKNVPRYYTM  120
IFEALSTIKD SNGCDIGTIV NFIKQRHEVP QNFRRQLSSK LRRLVSQGKL EKVQNCYQVK  180
KDNSLAVNTP TPKQKDVRQR ISQYTMGGGM PSGGDTLEDA AKAAAYKVAD AENKSFLAAE  240
AVKEAERIAK MAEDTDSMLQ IIKEIYEKCS RGESILLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.22e-76MYB_related family protein