PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980681.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 268aa MW: 29812.2 Da PI: 6.8962

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102	1e-31	31	156	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................sss 68 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak +i+el+ + s XP_022980681.1 31 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLpipsaslglhyqsmlpphtahrpefkinSG- 124 689*************************************************************555555555555444444333333222211. PP TCP 69 sasec.....eaesssssasnsssg............k 89 ++++++++++++ + + XP_022980681.1 125 ----IdkveiDDDDEQKQHKSN--SnpssfsallnnvS 156 ....011121111111111111..11233334444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MPSSSSSAAA AVATPWLRLK DPRIVRVSRA FGGKDRHSKV CTIRGLRDRR VRLSVSTAIQ 60 LYDLQDRLGL NQPSKVVDWL LNVAKDEIDE LPPLPIPSAS LGLHYQSMLP PHTAHRPEFK 120 INSGIDKVEI DDDDEQKQHK SNSNPSSFSA LLNNVSAPPF GFHWDPSSSS SSSTTNLPFF 180 TSQAEDLHNF NHVTPLSLST GSQFLEFNNH LHQNFFINNS LNTPPPMHSI THPAVRPFHF 240 SMATKFVSQD KNNNGDPAHK EDDFGSDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	6e-49	TCP family protein