PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980135.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 923aa MW: 101096 Da PI: 5.9105

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93	2.1e-29	544	595	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++s+++l++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ XP_022980135.1 544 AEKNVSFSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGILRWPSRKINKV 595 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 923 aa Download sequence
MATNLSISGW GNNCAVMDPV FTSCGISSIP PTSTCPSMEG STFPEGGSHE ILTLNELGGA 60 SISVVNSFTC GDEVMFQQPD TEFGVSDVSD NTNESGSNSN NVQDMDSCLI SRPIGWSLDE 120 RMLRALSLFK ESSPGGILAQ VWVPMKHGNQ FFLSTTDQPY LLDQMLTGYR EVSRWYTFSA 180 EGKLGSLLGL PGRVFNSKIP EWTSNVRYYS DAEYLRMEHA IGHEVYGSIA LPIFSNELER 240 SCCAVLEVVT TKEKPNFDAE IDIVSRALEI VSLRTIAPPR LYPQCLKQNQ RSVLAEITDV 300 LRAVCHAHRL PLALTWIPCC YTMQAVDEAA RVRVKENDVS PKGKSVLCIE ETACYVNDKA 360 TQGFVHACTE HHLEEGQGIV GKALQSNHPF FYPDVKAYNI NEYPLVHHAR KFGLNAAVAI 420 RLRSTYTGAD DYILEFFLPV NMKGSSEQQL LLNNLSGTMQ RMCRSLRTVS KDELLGAKDP 480 DAGFQSGMVG KSATTSRRNS QSTVTDSETR VSNSINDGTK AECPKKQQTT NGTRRQADKK 540 RSTAEKNVSF SVLQQYFSGS LKDAAKSIGV CPTTLKRICR QHGILRWPSR KINKVNRSLG 600 KIQTVLDSVK GVECRLKFDP TTGGLMAAGS LIPELNGQNS PLFSDNNPSI INLKPLPRDV 660 NSVPSIPFDS QNPTVKLEMD DQRNSSRSVL IPEKEPSVCQ LDCGEGSKST GLDAASCQLS 720 GLDVMDWDVP GNAAGCITAK KGNGLDFVEN NLRSCSFGAA NGVGTMWEGS DGMNEHYQPT 780 TSSMTDSSNG SGLLIHGSSS SGQSVEERKH LQEKTSCVDS DSKIVVKASY KEDTVRFKFD 840 PSLGYLQLYE EVGKRFKLNQ GTFQLKYLDD EKEWVMLVSN SDMQECLEVM DEIGTRNVKF 900 LVRDITCAVG SSGSSSCYLS GGS

Sequence ? help Back to Top

Protein Sequence Length: 923 aa Download sequence

MATNLSISGW GNNCAVMDPV FTSCGISSIP PTSTCPSMEG STFPEGGSHE ILTLNELGGA  60
SISVVNSFTC GDEVMFQQPD TEFGVSDVSD NTNESGSNSN NVQDMDSCLI SRPIGWSLDE  120
RMLRALSLFK ESSPGGILAQ VWVPMKHGNQ FFLSTTDQPY LLDQMLTGYR EVSRWYTFSA  180
EGKLGSLLGL PGRVFNSKIP EWTSNVRYYS DAEYLRMEHA IGHEVYGSIA LPIFSNELER  240
SCCAVLEVVT TKEKPNFDAE IDIVSRALEI VSLRTIAPPR LYPQCLKQNQ RSVLAEITDV  300
LRAVCHAHRL PLALTWIPCC YTMQAVDEAA RVRVKENDVS PKGKSVLCIE ETACYVNDKA  360
TQGFVHACTE HHLEEGQGIV GKALQSNHPF FYPDVKAYNI NEYPLVHHAR KFGLNAAVAI  420
RLRSTYTGAD DYILEFFLPV NMKGSSEQQL LLNNLSGTMQ RMCRSLRTVS KDELLGAKDP  480
DAGFQSGMVG KSATTSRRNS QSTVTDSETR VSNSINDGTK AECPKKQQTT NGTRRQADKK  540
RSTAEKNVSF SVLQQYFSGS LKDAAKSIGV CPTTLKRICR QHGILRWPSR KINKVNRSLG  600
KIQTVLDSVK GVECRLKFDP TTGGLMAAGS LIPELNGQNS PLFSDNNPSI INLKPLPRDV  660
NSVPSIPFDS QNPTVKLEMD DQRNSSRSVL IPEKEPSVCQ LDCGEGSKST GLDAASCQLS  720
GLDVMDWDVP GNAAGCITAK KGNGLDFVEN NLRSCSFGAA NGVGTMWEGS DGMNEHYQPT  780
TSSMTDSSNG SGLLIHGSSS SGQSVEERKH LQEKTSCVDS DSKIVVKASY KEDTVRFKFD  840
PSLGYLQLYE EVGKRFKLNQ GTFQLKYLDD EKEWVMLVSN SDMQECLEVM DEIGTRNVKF  900
LVRDITCAVG SSGSSSCYLS GGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein