PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979900.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 277aa MW: 31813.8 Da PI: 7.0768

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979900.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.3e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEd ll ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_022979900.1 14 KGRWTAEEDHLLTNYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51.8	1.9e-16	67	117	1	48
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE++++v++++ lG+ +W+ Ia +++ gRt++++k++w+++l XP_022979900.1 67 RGNITPEEEQKIVKLHNVLGNSlfyfRWSVIAGHLP-GRTDNEIKNYWNSHL 117 7999***************9**********.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MGRSPCCEKV GLRKGRWTAE EDHLLTNYIR ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRTNLKRGNI TPEEEQKIVK LHNVLGNSLF YFRWSVIAGH LPGRTDNEIK NYWNSHLSRR 120 IYTVTRPSAT KSSSPITCLL GIIPVPKRKR DVTYGRREEQ GGIVKGKEED DKEDGKTLGK 180 EVVLRSIMGD GDGESLGPYE WVDGEIMTLN NGMVKASGNQ CMDEDHGNGY CSSTPFEKDQ 240 WLNWEWEEYG SIHEGRFEKW ELEEISSWLR ETDQIDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	4e-70	MYB family protein