PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979884.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 302aa    MW: 33164.6 Da    PI: 6.6246
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-1752100355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  XP_022979884.1  52 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAAMAYDRAALSMKG 100
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MATSKASDKA YPVHEIAQTQ MGFALIQRNS SQISQTGGER RGRRKQGEPG RFLGVRRRPW  60
GRYAAEIRDP TTKERHWLGT FDTAHEAAMA YDRAALSMKG TQARTNFIYS DTSTFHSLLT  120
AFDAQSLLPN SALSHSKMVT PNKNNKNNNI PFTQSLPSNP SFDDLNTNFL FSNDSNSGYL  180
SCIVPDNCLK PPSDSTTSND LQKLSFFASN SIDSQGLDGS AMAYNSSNDG VWDEQKLWKS  240
NGDELSAIIN SSSSSSSTMV DENLHFHPFM NSSCGGLLPQ SSTCSTYAPP FGDVFDFGYP  300
LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-53ERF family protein