PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979849.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 346aa    MW: 36553.6 Da    PI: 9.0395
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.6e-11280325655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L++l+P+     +k  s +++L +Av++Ik Lq
  XP_022979849.1 280 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 325
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MRHMYQSNSS SSSSQKFMAS ANAGVGSGGG GGGGGLTRYG SAPGSLLTSA VDSVIGSRHP  60
DSVSSLRTPP SFSGHYFSSA DSSLKSSSST AAAVRSYGIH DLALGDFSTA RNFNSNGGQS  120
SSSSPLVRQK SSPAGFLGHL SVAERNGGGF SLTMGGGGNS IGRLKSQVRL NGQDSLSQIS  180
EMSEGFMEAA NSSANGLTPS TFGMDSCWDT SNNSIVFGAP HAKTSRHHPD AEFFTTLESQ  240
FSMPQTTLEM ATVERLLQIP EHSAPCKIRA KRGCATHPRS IAERERRTRI SGKLKKLQDL  300
VPNMDKQTSY SDMLDLAVQH IKGLQHQIQM LNKEAESCTC GNKECL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.22e-62bHLH family protein