PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979640.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 324aa MW: 36426.3 Da PI: 4.7693

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.9	1e-28	121	182	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 l+Dgy+WrKYGqK+++g++fpr YYrC+++ gC ++k+v+rs++dp+++++tY+g+H+++ XP_022979640.1 121 LNDGYSWRKYGQKDIHGANFPRCYYRCSHRherGCLATKQVQRSDNDPNIFDVTYRGRHTCN 182 58*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MEMEHKSLIT ELTQGKELAL QLRTYLHPSS SSSPAEPCFF LTERIQSSFE KALLLLKFNS 60 SSSIMPDPTT HKIASVEEEE EEGEPRKNKR KNSSDVKRRK LLPKWTEEIK ICRGTAPEGP 120 LNDGYSWRKY GQKDIHGANF PRCYYRCSHR HERGCLATKQ VQRSDNDPNI FDVTYRGRHT 180 CNQSTNNLGL VSGSLQNEIS GDQETGQNQQ RNPNSEIWFN FGVKSEDFDD VFPPISFLSS 240 PTMDLPLLAD GGLSAAPVSS ATSEETAWDW SGYHGGGILM VPSSEQSDMI SATTSVTNSP 300 ICNEDWDFDF DQNFPFDSLD FISS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	101	RKNKRKNSSDVKRRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	6e-43	WRKY family protein