PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979326.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 301aa    MW: 33650.3 Da    PI: 10.0584
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.5e-095591139
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q
   XP_022979326.1 55 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQ 91
                     789*****************77.*********.999766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MSMSYFPGID SVRPPTASLR TPAPPTSTSN CVASFPVSED ASKKIRKPYT ITKSRESWTE  60
QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QLFFFGGSRK NVQNLIRSHA QKYFLKIQKS  120
GKSEHVPPPR PKKKASHPYP QKAPKNATTQ SPGMYPPLST PFEPRYTYIP DSTAGFGLPS  180
PHASWSCSPV PTIDFSQVPE DRVKLAGPTS HSSSSGSTSR TRKIGEISDQ GDQSMRNRVI  240
MPDFAQVYSF IGSVFDPSMS GHLQRLRKMD PINLETALVL MQNLAINLIS PEFENHTDFI  300
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.23e-89MYB_related family protein