PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979325.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 317aa    MW: 35436.2 Da    PI: 10.0131
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-135599147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_022979325.1 55 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 99
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MSMSYFPGID SVRPPTASLR TPAPPTSTSN CVASFPVSED ASKKIRKPYT ITKSRESWTE  60
QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF LKIQKSGKSE HVPPPRPKKK  120
ASHPYPQKAP KNATTQSPGM YPPLSTPFEP RYTYIPDSTA GFGLPSPHAS WSCSPVPTID  180
FSQVPEDRVK LAGPTSHSSS SGSTSRTRKI GEISDQGDQS MRNRVIMPDF AQVYSFIGSV  240
FDPSMSGHLQ RLRKMDPINL ETALVLMQNL AINLISPEFE NHRRLISSYD EDMKQAKAGS  300
LYNSLYNVRS HNTILSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.24e-99MYB_related family protein