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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022979325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 317aa MW: 35436.2 Da PI: 10.0131 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.5 | 1.5e-13 | 55 | 99 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky XP_022979325.1 55 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 99 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MSMSYFPGID SVRPPTASLR TPAPPTSTSN CVASFPVSED ASKKIRKPYT ITKSRESWTE 60 QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF LKIQKSGKSE HVPPPRPKKK 120 ASHPYPQKAP KNATTQSPGM YPPLSTPFEP RYTYIPDSTA GFGLPSPHAS WSCSPVPTID 180 FSQVPEDRVK LAGPTSHSSS SGSTSRTRKI GEISDQGDQS MRNRVIMPDF AQVYSFIGSV 240 FDPSMSGHLQ RLRKMDPINL ETALVLMQNL AINLISPEFE NHRRLISSYD EDMKQAKAGS 300 LYNSLYNVRS HNTILSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 4e-99 | MYB_related family protein |