PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022978702.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 297aa    MW: 33544.4 Da    PI: 5.763
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022978702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.52.8e-1935132398
                     EE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     k l++sdv+++gr+vlpk+ aee+        +e+++++++   s+++W +k++y  +++s++yvl+ ++ +Fv++ngLk gD ++++  +++++
  XP_022978702.1  35 KDLKNSDVGSLGRIVLPKREAEENlpllT--DKEGIQIVMREvHSNKKWAMKYKYwaNNRSRMYVLE-NTGDFVRQNGLKMGDLMTLY--EDECK 124
                     7899**********************653..447789999995666********9877888889999.********************..66999 PP

                     ..EEEEE- CS
              B3  91 elvvkvfr 98 
                     +++v v++
  XP_022978702.1 125 NMYVAVVK 132
                     99998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MATHFLNTDT HNNANPNNFT LCTPDNKILR MLLKKDLKNS DVGSLGRIVL PKREAEENLP  60
LLTDKEGIQI VMREVHSNKK WAMKYKYWAN NRSRMYVLEN TGDFVRQNGL KMGDLMTLYE  120
DECKNMYVAV VKGENDSRRE ENEEMVRNND KNNKKNNQPC SFTNMCIKDE EEDASLAMLI  180
EELKHKPEDE DRPLSCSTST SSSNSSSNNN NNAVMASDSY LSTTQQQPSS SNMMGAAAAK  240
GIHNSNNNKK KKNGSKEGGE DLQAVNGLED CFRGLDTLPE VSGFKFPLFD YLSNDRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28300.13e-48B3 family protein