PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977493.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 401aa MW: 46311.9 Da PI: 8.5958

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.9	7.5e-11	279	326	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W++I r++ +Rt+ +++++w+++l XP_022977493.1 279 WTLTEVMRLVDGIAEYGTGRWTRIKRHLFassPHRTPIDLRDKWRNLL 326 **************************99**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MDQEVHFCQK FTNMNYHWVK VEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR 60 DFGYEIQTNG DAEVDENSFR QNRGLQLGKL SSESKSQGSS RSDTDAFEIS ELSATMVMEA 120 EFNNTPVERS LTHELFSGLR TRGGCATPFE GNICNTILDN NNIHKFNTNE NYLENEKISD 180 EKGDIVASKL ASCSRERRLR KPTRRYIEEF ADSKSENNKG RRKPPTKDKY LKVTSTEESN 240 HIRQGFLSED EPSATECKNV YSSAKICKKY DRRKHQKMWT LTEVMRLVDG IAEYGTGRWT 300 RIKRHLFASS PHRTPIDLRD KWRNLLKASC VNIQNSKGTE CKQPHASRPL PKSLLQRVYE 360 LANIYPYPKE RSPKSVREAT PPMYLIESNS LSFNWGRKKY E

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MDQEVHFCQK FTNMNYHWVK VEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR  60
DFGYEIQTNG DAEVDENSFR QNRGLQLGKL SSESKSQGSS RSDTDAFEIS ELSATMVMEA  120
EFNNTPVERS LTHELFSGLR TRGGCATPFE GNICNTILDN NNIHKFNTNE NYLENEKISD  180
EKGDIVASKL ASCSRERRLR KPTRRYIEEF ADSKSENNKG RRKPPTKDKY LKVTSTEESN  240
HIRQGFLSED EPSATECKNV YSSAKICKKY DRRKHQKMWT LTEVMRLVDG IAEYGTGRWT  300
RIKRHLFASS PHRTPIDLRD KWRNLLKASC VNIQNSKGTE CKQPHASRPL PKSLLQRVYE  360
LANIYPYPKE RSPKSVREAT PPMYLIESNS LSFNWGRKKY E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	202	ERRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-24	MYB_related family protein