PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977491.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 435aa MW: 50158.3 Da PI: 8.779

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.3e-11	313	360	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W++I r++ +Rt+ +++++w+++l XP_022977491.1 313 WTLTEVMRLVDGIAEYGTGRWTRIKRHLFassPHRTPIDLRDKWRNLL 360 **************************99**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MDQEVHFCQK FTNMNYHWVK VEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR 60 DFGYEIQTNG DAEVDENSFR QNRGLQLGKL SSESKSQGSS RSDTDAFEIS ELSATMVMEA 120 EFNNTPVERS LTHELFSGLR TRGGCATPFE GNICNTILDN NNIHKFNTNE NYLENEKISD 180 EKGDIVASKL ASCSRERRLR KPTRRYIEEF ADSKSENNKG RRKPPTKDKY LKVTSTEESN 240 HIRQVQMLTP KDELHCGTSV PVQSRSQRRH PEKHVPVSGF LSEDEPSATE CKNVYSSAKI 300 CKKYDRRKHQ KMWTLTEVMR LVDGIAEYGT GRWTRIKRHL FASSPHRTPI DLRDKWRNLL 360 KASCVNIQNS KGTECKQPHA SRPLPKSLLQ RVYELANIYP YPKERSPKSV REATPPMYLI 420 ESNSLSFNWG RKKYE

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MDQEVHFCQK FTNMNYHWVK VEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR  60
DFGYEIQTNG DAEVDENSFR QNRGLQLGKL SSESKSQGSS RSDTDAFEIS ELSATMVMEA  120
EFNNTPVERS LTHELFSGLR TRGGCATPFE GNICNTILDN NNIHKFNTNE NYLENEKISD  180
EKGDIVASKL ASCSRERRLR KPTRRYIEEF ADSKSENNKG RRKPPTKDKY LKVTSTEESN  240
HIRQVQMLTP KDELHCGTSV PVQSRSQRRH PEKHVPVSGF LSEDEPSATE CKNVYSSAKI  300
CKKYDRRKHQ KMWTLTEVMR LVDGIAEYGT GRWTRIKRHL FASSPHRTPI DLRDKWRNLL  360
KASCVNIQNS KGTECKQPHA SRPLPKSLLQ RVYELANIYP YPKERSPKSV REATPPMYLI  420
ESNSLSFNWG RKKYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	202	ERRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	3e-24	MYB_related family protein