PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977219.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 349aa MW: 38195 Da PI: 5.4525

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.5	1.4e-14	174	220	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P++ kK++Ka+iL A+ YIk+Lq XP_022977219.1 174 DHVIAERKRREKLSQRFVALSALIPHL-----KKMDKASILGDAIAYIKDLQ 220 6999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MEISSAKWLS DMDLESAFME DFEMNPFECT LDELSFQTFS DESHTSHLDL ENSVQTPPPP 60 PAKQPRTSGS WNNSSTTRQI ASMAASSSSS HIISFGNSHS SSPPASNKLV GSNGNYSNVK 120 PKFEIGCEGN IDLSSVIPQG SYENNPNCSP KYDGVGMKRG ASAMNYRSAL VAQDHVIAER 180 KRREKLSQRF VALSALIPHL KKMDKASILG DAIAYIKDLQ ERLKVADEEA AKSRVESVVV 240 VNRSEDVSAV VEDDSSEENS SSDRAIPEIE ARVSGKDVLL KIHGKKCKGC LSNMLNHIEE 300 LNLTVLNSSA LPFGNFRIDI TIIAKMGDGF SMTVTELVQK LRQACLQFV

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MEISSAKWLS DMDLESAFME DFEMNPFECT LDELSFQTFS DESHTSHLDL ENSVQTPPPP  60
PAKQPRTSGS WNNSSTTRQI ASMAASSSSS HIISFGNSHS SSPPASNKLV GSNGNYSNVK  120
PKFEIGCEGN IDLSSVIPQG SYENNPNCSP KYDGVGMKRG ASAMNYRSAL VAQDHVIAER  180
KRREKLSQRF VALSALIPHL KKMDKASILG DAIAYIKDLQ ERLKVADEEA AKSRVESVVV  240
VNRSEDVSAV VEDDSSEENS SSDRAIPEIE ARVSGKDVLL KIHGKKCKGC LSNMLNHIEE  300
LNLTVLNSSA LPFGNFRIDI TIIAKMGDGF SMTVTELVQK LRQACLQFV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	184	ERKRRE
2	180	185	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	2e-41	bHLH family protein