PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022976322.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 332aa    MW: 37204.9 Da    PI: 6.1606
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022976322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.71.4e-17220254135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022976322.1 220 CLHCATDKTPQWRTGPFGPKTLCNACGVRYKSGRL 254
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MEAPHYFHPA FSTQNPHSSN TLETTAAAAA VADHFLVEDL LDFSNDDHVV FTDSTSDNQT  60
PTSTDSSTLT LLEQPNNGHH NYSFLDANFS TDLAVPYDDL AELEWLSNFV EDSFSTDDLE  120
KLSLISGVNS RTDDDAAAKP REFQTELSAG FHPDMSVPAK AARSKRSRAC IWNSRVSVLS  180
PTNSSSETDV VVTLTAKKTS KKKETPDDTL SPSNGEGRKC LHCATDKTPQ WRTGPFGPKT  240
LCNACGVRYK SGRLVPEYRP AASPTFVLTK HSNSHRKVME LRRQKEMMRA QQQHHHHQQQ  300
QHLHQETMEF NHASNNDNDD YLIHQHIAPI YE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-68GATA family protein