PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976301.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 556aa MW: 60377.1 Da PI: 8.9446

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.7	2.2e-07	205	249	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ d+ l av+++G g+W+ I + g Rt+ q+ rw XP_022976301.1 205 RKPWSKTQDLELMAAVEKYGEGNWANILKadFKG-DRTASQLSQRW 249 789************************7621455.89999988888 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MIEMKEKQKK GTISNEDSFA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN 60 VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI 120 ANGIPSESDV PSSSVVEAPL TIGISSNSRS FRASLENPQS ACLMQGMYVT VPISIRRQPL 180 PTPSATEVFD VNGAAGSNAA SRKRRKPWSK TQDLELMAAV EKYGEGNWAN ILKADFKGDR 240 TASQLSQRWS IIRKRHGNLN VGANTTSTQI SKAQIDAAHR ALSLALDLPV NYSKSANSNM 300 NSSTVSSTSG AEAPVQIQNQ SPQVLVPLRP LQVKPLPPAA KSGINTDKNT LMMKSTHNSD 360 SIVRATAVAA GARIVSPFDA ASLMKVAQTK NAIHIKSKCV SSIQPPVLGN ASTHLDAQPS 420 VHYISTGRTA TPGSNYVGGK STMAGNNSMK YVTPKAPYNC STAVLTNPSN QISPTTESPL 480 KQEVKSSEEC KISKPIITSK DDSRENRTVV RDVFASLISD WESGSRSTCI ENQNTSLNME 540 IDENDIKAAC PQAGRK

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MIEMKEKQKK GTISNEDSFA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN  60
VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI  120
ANGIPSESDV PSSSVVEAPL TIGISSNSRS FRASLENPQS ACLMQGMYVT VPISIRRQPL  180
PTPSATEVFD VNGAAGSNAA SRKRRKPWSK TQDLELMAAV EKYGEGNWAN ILKADFKGDR  240
TASQLSQRWS IIRKRHGNLN VGANTTSTQI SKAQIDAAHR ALSLALDLPV NYSKSANSNM  300
NSSTVSSTSG AEAPVQIQNQ SPQVLVPLRP LQVKPLPPAA KSGINTDKNT LMMKSTHNSD  360
SIVRATAVAA GARIVSPFDA ASLMKVAQTK NAIHIKSKCV SSIQPPVLGN ASTHLDAQPS  420
VHYISTGRTA TPGSNYVGGK STMAGNNSMK YVTPKAPYNC STAVLTNPSN QISPTTESPL  480
KQEVKSSEEC KISKPIITSK DDSRENRTVV RDVFASLISD WESGSRSTCI ENQNTSLNME  540
IDENDIKAAC PQAGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	1e-65	MYB_related family protein