PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022975317.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARF

Protein Properties

Length: 941aa MW: 104926 Da PI: 6.6601

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022975317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52	1.3e-16	6	69	34	99
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++l+ +d++ +sW++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ +l+++++r+ XP_022975317.1 6 QELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEKSQLLLGIRRA 69 48999*********************************************..45677789999997 PP
2	Auxin_resp	124.3	8.7e-41	94	176	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k++ka++ +vs+GmRf+m+fete+s rr++Gt++g+sd+d+vrW+nS+Wr+L+ XP_022975317.1 94 AAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYAQVSLGMRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQ 176 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 941 aa Download sequence
MQPPAQELVA RDLHDNSWTF RHIYRGQPKR HLLTTGWSVF VSTKRLFAGD SVLFIRDEKS 60 QLLLGIRRAN RQQPALSSSV ISSDSMHIGI LASAAHAAAN NSPFTIFYNP RASPSEFVIP 120 LAKYNKAMYA QVSLGMRFRM MFETEESGVR RYMGTITGIS DMDSVRWKNS QWRNLQVGWD 180 ESAAGERPNR VSIWEVEPVV TPFYICPPPF FRPKFLKQPG MPDDESEIEN AFKRAMPWFG 240 DEFGMKDASS SIFPGLSLVQ WMSMQHNNQF PAAQSGILPS MVAPSALHGT FTNDESSKLL 300 SFQAPVMSSP NLQFSKANQQ NQVAQLPPTT WSQQQQVQQL LQVPASQQQQ QQLPLQQELQ 360 QQVPQQQQLQ MQQPQRHQQT SQSALLNNSV TAPNHLPNQT LQQPLVYSQL QQQKLLAGNI 420 QSHQTSQPSN KNLFQTTSLS QEVQFQPQIE QQPSLLPKHQ QPTQVQQAPL QLMQQSLSQR 480 AQQQPQVQQF SQPVPTEQQL QLQLLQKLQQ QQQQQQHPLL SPASPLLPPQ LLQQQNVHQE 540 NQQLPPLPLS NQQQFNTSGG SLQTEKHNSN GFSSLGLMQS QQAPITHSHN QFKPTMAIRA 600 YSGLTDGDAP SCSTSPSTNN CQVSASNMLN KNQQGAATLG GDPVAEPVTN LAQDLQSKPD 660 LRIKHEFPSS KGLDQLKYKG TVPDQLEACS SGTSYCLDAG TIQQTFPLPT CLDNDVQSHT 720 RNNIPFSNSM DGLAPDTLLS RGYDSQKDLQ NLLSNYGGGV PRDIETELST AAISSQSFGV 780 PNLPFKSDCS NDVNVNEAGA LSSGLWANHS QRMRTYTKVQ KRGSVGRCID VTRYKGYDEL 840 RHDLARMFGI EGQLEDPQRT DWKLVYVDHE TDILLVGDDP WEEFVSCVQS IKILSSAEVQ 900 QMSLDGNLGH IQAPNQACSG TDSGNAWRGQ YDDNSAASFN R

Sequence ? help Back to Top

Protein Sequence Length: 941 aa Download sequence

MQPPAQELVA RDLHDNSWTF RHIYRGQPKR HLLTTGWSVF VSTKRLFAGD SVLFIRDEKS  60
QLLLGIRRAN RQQPALSSSV ISSDSMHIGI LASAAHAAAN NSPFTIFYNP RASPSEFVIP  120
LAKYNKAMYA QVSLGMRFRM MFETEESGVR RYMGTITGIS DMDSVRWKNS QWRNLQVGWD  180
ESAAGERPNR VSIWEVEPVV TPFYICPPPF FRPKFLKQPG MPDDESEIEN AFKRAMPWFG  240
DEFGMKDASS SIFPGLSLVQ WMSMQHNNQF PAAQSGILPS MVAPSALHGT FTNDESSKLL  300
SFQAPVMSSP NLQFSKANQQ NQVAQLPPTT WSQQQQVQQL LQVPASQQQQ QQLPLQQELQ  360
QQVPQQQQLQ MQQPQRHQQT SQSALLNNSV TAPNHLPNQT LQQPLVYSQL QQQKLLAGNI  420
QSHQTSQPSN KNLFQTTSLS QEVQFQPQIE QQPSLLPKHQ QPTQVQQAPL QLMQQSLSQR  480
AQQQPQVQQF SQPVPTEQQL QLQLLQKLQQ QQQQQQHPLL SPASPLLPPQ LLQQQNVHQE  540
NQQLPPLPLS NQQQFNTSGG SLQTEKHNSN GFSSLGLMQS QQAPITHSHN QFKPTMAIRA  600
YSGLTDGDAP SCSTSPSTNN CQVSASNMLN KNQQGAATLG GDPVAEPVTN LAQDLQSKPD  660
LRIKHEFPSS KGLDQLKYKG TVPDQLEACS SGTSYCLDAG TIQQTFPLPT CLDNDVQSHT  720
RNNIPFSNSM DGLAPDTLLS RGYDSQKDLQ NLLSNYGGGV PRDIETELST AAISSQSFGV  780
PNLPFKSDCS NDVNVNEAGA LSSGLWANHS QRMRTYTKVQ KRGSVGRCID VTRYKGYDEL  840
RHDLARMFGI EGQLEDPQRT DWKLVYVDHE TDILLVGDDP WEEFVSCVQS IKILSSAEVQ  900
QMSLDGNLGH IQAPNQACSG TDSGNAWRGQ YDDNSAASFN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-167	ARF family protein