PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974958.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 593aa    MW: 67029.6 Da    PI: 5.789
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix932.9e-2968152187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe+laL+++r++m+ ++r+++ k+plWe+vs+k+ e g++rs+k+Ckek+en+ k++k+++e +++  +++s+t+++f+qlea
  XP_022974958.1  68 RWPRQETLALLKIRSDMDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTREVRSG--KPDSKTYKFFEQLEA 152
                     8********************************************************************9..58999********85 PP
2trihelix99.82.2e-31412497187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k ev aLi++r+++e +++++  k+plWee+s++m++ g++r++k+Ckekwen+nk++kk+ke++k r +e+s+tcpyf+ql+a
  XP_022974958.1 412 RWPKVEVEALIKLRTNLEAKYQENVPKGPLWEEISSAMKKIGYNRNAKRCKEKWENINKYFKKVKETRKTR-PEDSKTCPYFHQLDA 497
                     8********************************************************************97.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MLGDSTTSVL GGGAAVPETN HCHDEVIGDM GDGGGVAAAE EINNNSGEEE RRRSGGGDDG  60
DRSFGGNRWP RQETLALLKI RSDMDVAFRD ASVKGPLWEQ VSRKLGELGY HRSAKKCKEK  120
FENVYKYHKR TREVRSGKPD SKTYKFFEQL EALENHPPFN FNPPPPPPPP STTVIPTVXS  180
TTTLPHLMNI SFSQPNPTIH LPSPPRPAPF NNLTTSSVPV GFLEADLISN STSDDVDDSS  240
TSSETPRRRT KKRKWKEFFE KLMKEVIQKQ VEMQKRFLEA IEKREQERIV REEAWRIQEM  300
AKINREREIL AHERSMAAAK DAAITSFLQK ITESQNNNSN NNNNLSRTPP PPPPPQQQPI  360
PMSNPTPVVQ PPPPPPPSST LQVVLPQKME IMKMDHNGGE NYTMSPASSS SRWPKVEVEA  420
LIKLRTNLEA KYQENVPKGP LWEEISSAMK KIGYNRNAKR CKEKWENINK YFKKVKETRK  480
TRPEDSKTCP YFHQLDALYR EKGGGNNNNN NNRKLELENI GSSTMIPLMV QPEQQWPPQQ  540
EITRPDSGNE EMESEPMDRD DKDDDDEEEE EEDEGGGNYE IVASKPTSVS TAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1246254PRRRTKKRK
2248254RRTKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.12e-71Trihelix family protein