PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974937.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 616aa MW: 68158.8 Da PI: 6.0965

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.4	5.1e-13	444	490	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_022974937.1 444 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 490 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MKIEDGLRGV GGKDEDKTVV AAVLGTRAFN YMMSCSVSNE NLFMAVRNDD NLQNKLADLV 60 ETPNASNFCW NYAIFWQLSH SKSGQWVLGW GDGSFRDPRD GEGTEATQIL SLELEDESQQ 120 RMKKRALQKL HTLFGGSDED NYALGLDRVT DTEMFFLASM YFSFPGGEGG PGKCFASGKH 180 VWHLDVLNSP AEYCVRSYLA KSAGIRTIVL VPTDVGVVEL GSVRSVSESL ELVHLIRSLF 240 SSQRSLDGVR TLAVMSRMAE RKDENALFPS LGIAERGGGV PKVFGQSLNS GNVGRSHFRE 300 KLAVRKMDER AWEVCPNGGR IQFQSPRKGV RSPSLGHVHL LKQGNPTETL GSPTPPVNNN 360 HEQLVNGVRD EFCLNPYQSQ KIAQMQIDFS VATSRPTPVM NRVVADSEQL DVEPQCKEEG 420 PGTDERRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG 480 DAIAYINELQ SKVKAMEYER EQSGITSSEA TPSETNPEIE NKDQFLDVDI DVEAGNDEVI 540 VKVSCPLESH PASRVIKAMK NAQISVVDSK LSVEVNDTVL HTFTIKSPGS EQLTKEELIA 600 TISRDSTPLH PLSTVG

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MKIEDGLRGV GGKDEDKTVV AAVLGTRAFN YMMSCSVSNE NLFMAVRNDD NLQNKLADLV  60
ETPNASNFCW NYAIFWQLSH SKSGQWVLGW GDGSFRDPRD GEGTEATQIL SLELEDESQQ  120
RMKKRALQKL HTLFGGSDED NYALGLDRVT DTEMFFLASM YFSFPGGEGG PGKCFASGKH  180
VWHLDVLNSP AEYCVRSYLA KSAGIRTIVL VPTDVGVVEL GSVRSVSESL ELVHLIRSLF  240
SSQRSLDGVR TLAVMSRMAE RKDENALFPS LGIAERGGGV PKVFGQSLNS GNVGRSHFRE  300
KLAVRKMDER AWEVCPNGGR IQFQSPRKGV RSPSLGHVHL LKQGNPTETL GSPTPPVNNN  360
HEQLVNGVRD EFCLNPYQSQ KIAQMQIDFS VATSRPTPVM NRVVADSEQL DVEPQCKEEG  420
PGTDERRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG  480
DAIAYINELQ SKVKAMEYER EQSGITSSEA TPSETNPEIE NKDQFLDVDI DVEAGNDEVI  540
VKVSCPLESH PASRVIKAMK NAQISVVDSK LSVEVNDTVL HTFTIKSPGS EQLTKEELIA  600
TISRDSTPLH PLSTVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	426	434	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein