PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974421.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 790aa MW: 85968.7 Da PI: 5.6059

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.4e-16	492	530	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_022974421.1 492 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 530 689**********************************96 PP
2	TCR	50.5	4e-16	577	615	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_022974421.1 577 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 615 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MDTPERKQIA TTSVSKFEDS PVFNYINNLS PIQPVKSIHT TQTFNSLSFA SLPSVFTSPH 60 VSSYKESRFL RRHSVADLSK PDFASENGNK VDTNGGVTGS VSQLQENSSA PDGNSDSLSN 120 PTKLPSVHPL STKEEPQAMK SDSARPDCDQ KLPDSVTESG EDPALIEPYV HNKSGNGSAE 180 AEAEANKQVV SLTEEREATG YDWESLITEG SDLLIFSSPN GSEAIRLVQK PLDLVTGFTS 240 STLSQIMEND NTNLSKMRIA DPIESSGGQQ EIEFLSSQAG EARELKDMDR AIDSLSFPNS 300 SNSMSREITD DEVARYITDD CKPVSNLYRG MRRRCLDFEA AVSRRKNLED GSTSGSVSTH 360 PEEKMPSVDK QLVPYKTGGV ASRCILTGIG LHLNALATAS KDAKTLNQEK FSSEKQLNLP 420 NSSASCHSPS TGLDPRLTSV VTERDMDPSE NGVHNEEDAV RASAYVLVED FNQNSPKKKR 480 RRLEHAGETE SSCKRCNCKK SKCLKLYCEC FAAGVYCIEP CSCQDCFNKP IHEDTVLATR 540 KQIESRNPLA FAPKVIRNLD SLPEPGDESN KTPASARHKR GCNCKKSSCL KKYCECYQGG 600 VGCSISCRCE GCKNAFGRKD GSSLLGLETE QEEEEPETNQ ASAMDDKALH GPEIPNNEEQ 660 NPGSAIPSTP LQHCRQLVPL PFSSRSKPLR SSFLNVGSSS GFYTGNKLEK PNILQSQPDP 720 GKNTLPGMED EMPDILCGNC SPGAGVKTGS PNSKRISPPQ SDFGLSPLPR TGRKLILQSI 780 PSFPSLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MDTPERKQIA TTSVSKFEDS PVFNYINNLS PIQPVKSIHT TQTFNSLSFA SLPSVFTSPH  60
VSSYKESRFL RRHSVADLSK PDFASENGNK VDTNGGVTGS VSQLQENSSA PDGNSDSLSN  120
PTKLPSVHPL STKEEPQAMK SDSARPDCDQ KLPDSVTESG EDPALIEPYV HNKSGNGSAE  180
AEAEANKQVV SLTEEREATG YDWESLITEG SDLLIFSSPN GSEAIRLVQK PLDLVTGFTS  240
STLSQIMEND NTNLSKMRIA DPIESSGGQQ EIEFLSSQAG EARELKDMDR AIDSLSFPNS  300
SNSMSREITD DEVARYITDD CKPVSNLYRG MRRRCLDFEA AVSRRKNLED GSTSGSVSTH  360
PEEKMPSVDK QLVPYKTGGV ASRCILTGIG LHLNALATAS KDAKTLNQEK FSSEKQLNLP  420
NSSASCHSPS TGLDPRLTSV VTERDMDPSE NGVHNEEDAV RASAYVLVED FNQNSPKKKR  480
RRLEHAGETE SSCKRCNCKK SKCLKLYCEC FAAGVYCIEP CSCQDCFNKP IHEDTVLATR  540
KQIESRNPLA FAPKVIRNLD SLPEPGDESN KTPASARHKR GCNCKKSSCL KKYCECYQGG  600
VGCSISCRCE GCKNAFGRKD GSSLLGLETE QEEEEPETNQ ASAMDDKALH GPEIPNNEEQ  660
NPGSAIPSTP LQHCRQLVPL PFSSRSKPLR SSFLNVGSSS GFYTGNKLEK PNILQSQPDP  720
GKNTLPGMED EMPDILCGNC SPGAGVKTGS PNSKRISPPQ SDFGLSPLPR TGRKLILQSI  780
PSFPSLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	476	483	PKKKRRRL
2	477	482	KKKRRR
3	479	483	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-107	CPP family protein