PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974210.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 274aa MW: 31226.1 Da PI: 10.3486

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	138.4	5.7e-43	106	246	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssa.....sec....eaesssssasn 84 +gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+s+tieWLl ++ aik+l + + + s c ea+s+ +n XP_022974210.1 106 TGKKDRHSKIYTAQGPRDRRIRLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSlanN---SghrygSVCcgstEAVSEMI-RDN 196 79************************************************************6542...33456677776422222222.233 PP TCP 85 sssgkaaksaa.kskksqksaasalnlakesrakarararertrekmrik 133 ++ g aak+aa +++k++ + + + +esr +ararar+rt k+ ++ XP_022974210.1 197 NGGGGAAKEAAfMATPKHKQSRALRRVGRESRDRARARARQRTMLKKTKQ 246 44446666666688888888888999***************9887766 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MMNPNMFGSN NNTQTNHIAL QHQEQHEENL YLHFPHPFLD HDDLFLTHIL SSQQFFIGAD 60 CWGEQEQEHE HDQTKQNSEK PRIEVVKKKK KKCSGNRKNG SSRKKTGKKD RHSKIYTAQG 120 PRDRRIRLSL QIARKFFDLQ DMLGFDKASN TIEWLLSNST SAIKDLQHSL ANNSGHRYGS 180 VCCGSTEAVS EMIRDNNGGG GAAKEAAFMA TPKHKQSRAL RRVGRESRDR ARARARQRTM 240 LKKTKQPISN LQDVSSVVAI SDDLWDFASI QSIL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	109	KKKKKKCSGNRKNGSSRKKTGKK
2	88	110	KKKKKKCSGNRKNGSSRKKTGKK
3	89	111	KKKKKKCSGNRKNGSSRKKTGKK
4	228	238	RDRARARARQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	4e-30	TCP family protein