PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973712.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1110aa MW: 123652 Da PI: 9.1857

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.4	1.6e-08	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ +E e++++a +++G++ Wk++a+ + +R+ +++ XP_022973712.1 46 QWSRDEVEQFYEAYRKYGKD-WKKVAAAVR-NRSTEMV 81 6***************99.*****.98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1110 aa Download sequence
MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR 60 KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLMRFQR 120 DSESEQESNE DSGATRKPQK RLRGKSRNNN SKGLDAHSSQ SQSLPTNYGC LSLLKKRRSG 180 IKPHAVGKRT PRVPVSYSYD KDSRERIFSP SRHTSKLKVD DPNDDDVAHE IALVLTEASQ 240 RDGSPQLSQT PNPKIEGHVL SPIRNDRMRS ESDMMSTKFR CSEMDEGGCE LSLGSTGADN 300 ADYDQGKNTR EIQRKGKRYY GKKAEVEESM YNHLDDIKEA CSGTEEGQKS GSLRGKLETE 360 DFDVKSVRTS FKGPRKRSKK ALFGDECSAF DALQTLADLS LMMPDTTADT EPSAKVKEEN 420 LDVMDKSKMK GNHSVVGAGI SASKTSKTGK ASGNNVGPIP EGEGIQGSNN GNRKRKQKSS 480 PFKISSKDED SNDSRVNDTP KTKATDDGKS SFGKVKRSPH NAGLAKSSKI SKPLDHHSSS 540 STDHKREDGD YALSTTQVPS INPISLPTKM RSRRKMDLLK SQRDSKIADN ILIDQLNVTA 600 HSLDDRPHDL KEQHSNCLSW HKLRRWCVFE WLYSAIDFPW FAKCEFVEYL NHVGLGHIPR 660 LTRVEWGVIR SSLGRPRRFS AQFLKEEKHK LNQYRESVRK HYAELRAGTR EGLPTDLARP 720 LSVGQRVIAI HPKTREIHDG SVLTVDYSRC RVQFDRPELG VEFVMDIECM PLNPVENMPA 780 NLSRHGVTLD KIFGNLNEVK INGLLKEAKI EDYIKSTSND KLESTDGSVF ISPSTHHINK 840 LIKQAKEVVV SELKRLNDEV LENQINGDNL LKDSENFKKQ YAAVLLQLNE VNEQVSSALY 900 SLRQRNTYQG TSPLMFLKPV HDLGDPCSHA QEPGSHVAEI VGSSRAKART MIDEAMQAIL 960 SLKKRESNLE NIEEAIDFVS NKLSVDDLAL PTVKSTSADT SNATPVSQNH FNAGASNPSA 1020 ANYVVGSKSN SPSDKPEVEI PSELIAHCVA TLLMIQKCTE RQFPPADVAQ VLDSAVNSLQ 1080 PCCPQNLPLY AEIQKCMGII RSQILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1110 aa Download sequence

MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR  60
KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLMRFQR  120
DSESEQESNE DSGATRKPQK RLRGKSRNNN SKGLDAHSSQ SQSLPTNYGC LSLLKKRRSG  180
IKPHAVGKRT PRVPVSYSYD KDSRERIFSP SRHTSKLKVD DPNDDDVAHE IALVLTEASQ  240
RDGSPQLSQT PNPKIEGHVL SPIRNDRMRS ESDMMSTKFR CSEMDEGGCE LSLGSTGADN  300
ADYDQGKNTR EIQRKGKRYY GKKAEVEESM YNHLDDIKEA CSGTEEGQKS GSLRGKLETE  360
DFDVKSVRTS FKGPRKRSKK ALFGDECSAF DALQTLADLS LMMPDTTADT EPSAKVKEEN  420
LDVMDKSKMK GNHSVVGAGI SASKTSKTGK ASGNNVGPIP EGEGIQGSNN GNRKRKQKSS  480
PFKISSKDED SNDSRVNDTP KTKATDDGKS SFGKVKRSPH NAGLAKSSKI SKPLDHHSSS  540
STDHKREDGD YALSTTQVPS INPISLPTKM RSRRKMDLLK SQRDSKIADN ILIDQLNVTA  600
HSLDDRPHDL KEQHSNCLSW HKLRRWCVFE WLYSAIDFPW FAKCEFVEYL NHVGLGHIPR  660
LTRVEWGVIR SSLGRPRRFS AQFLKEEKHK LNQYRESVRK HYAELRAGTR EGLPTDLARP  720
LSVGQRVIAI HPKTREIHDG SVLTVDYSRC RVQFDRPELG VEFVMDIECM PLNPVENMPA  780
NLSRHGVTLD KIFGNLNEVK INGLLKEAKI EDYIKSTSND KLESTDGSVF ISPSTHHINK  840
LIKQAKEVVV SELKRLNDEV LENQINGDNL LKDSENFKKQ YAAVLLQLNE VNEQVSSALY  900
SLRQRNTYQG TSPLMFLKPV HDLGDPCSHA QEPGSHVAEI VGSSRAKART MIDEAMQAIL  960
SLKKRESNLE NIEEAIDFVS NKLSVDDLAL PTVKSTSADT SNATPVSQNH FNAGASNPSA  1020
ANYVVGSKSN SPSDKPEVEI PSELIAHCVA TLLMIQKCTE RQFPPADVAQ VLDSAVNSLQ  1080
PCCPQNLPLY AEIQKCMGII RSQILALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	473	503	RKRKQKSSPFKISSKDEDSNDSRVNDTPKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein