PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973711.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1150aa MW: 127860 Da PI: 9.1314

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.3	1.7e-08	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ +E e++++a +++G++ Wk++a+ + +R+ +++ XP_022973711.1 46 QWSRDEVEQFYEAYRKYGKD-WKKVAAAVR-NRSTEMV 81 6***************99.*****.98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1150 aa Download sequence
MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR 60 KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLMRFQR 120 DSESEQESNE DSGATRKPQK RLRGKSRNNN SKGLDAHSSQ SQSLPTNYGC LSLLKKRRSG 180 IKPHAVGKRT PRVPVSYSYD KDSRERIFSP SRHTSKLKVD DPNDDDVAHE IALVLTEASQ 240 RDGSPQLSQT PNPKIEGHVL SPIRNDRMRS ESDMMSTKFR CSEMDEGGCE LSLGSTGADN 300 ADYDQGKNTR EIQRKGKRYY GKKAEVEESM YNHLDDIKEA CSGTEEGQKS GSLRGKLETE 360 DFDVKSVRTS FKGPRKRSKK ALFGDECSAF DALQTLADLS LMMPDTTADT EPSAKVKEEN 420 LDVMDKSKMK GNHSVVGAGI SASKTSKTGK ASGNNVGPIP EGEGIQGSNN GNRKRKQKSS 480 PFKISSKDED SNDSRVNDTP KTKATDDGKS SFGKVKRSPH NAGLAKSSKI SKPLDHHSSS 540 STDHKREDGD YALSTTQVPS INPISLPTKM RSRRKMDLLK SQRDSKIADN ILIDQLNEQH 600 SNCLSWHKLR RWCVFEWLYS AIDFPWFAKC EFVEYLNHVG LGHIPRLTRV EWGVIRSSLG 660 RPRRFSAQFL KEEKHKLNQY RESVRKHYAE LRAGTREGLP TDLARPLSVG QRVIAIHPKT 720 REIHDGSVLT VDYSRCRVQF DRPELGVEFV MDIECMPLNP VENMPANLSR HGVTLDKIFG 780 NLNEVKINGL LKEAKIEDYI KSTSNDKLES TDGSVFISPS THHINKLIKQ AKVDLGCSNL 840 RTKFGLNETV GIQQEASSQL SVLAQIQAKE ADVHALSELS RALDKKEVVV SELKRLNDEV 900 LENQINGDNL LKDSENFKKQ YAAVLLQLNE VNEQVSSALY SLRQRNTYQG TSPLMFLKPV 960 HDLGDPCSHA QEPGSHVAEI VGSSRAKART MIDEAMQAIL SLKKRESNLE NIEEAIDFVS 1020 NKLSVDDLAL PTVKSTSADT SNATPVSQNH FNAGASNPSA ANYVVGSKSN SPSDKPEVEI 1080 PSELIAHCVA TLLMIQKCTE RQFPPADVAQ VLDSAVNSLQ PCCPQNLPLY AEIQKCMGII 1140 RSQILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1150 aa Download sequence

MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR  60
KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLMRFQR  120
DSESEQESNE DSGATRKPQK RLRGKSRNNN SKGLDAHSSQ SQSLPTNYGC LSLLKKRRSG  180
IKPHAVGKRT PRVPVSYSYD KDSRERIFSP SRHTSKLKVD DPNDDDVAHE IALVLTEASQ  240
RDGSPQLSQT PNPKIEGHVL SPIRNDRMRS ESDMMSTKFR CSEMDEGGCE LSLGSTGADN  300
ADYDQGKNTR EIQRKGKRYY GKKAEVEESM YNHLDDIKEA CSGTEEGQKS GSLRGKLETE  360
DFDVKSVRTS FKGPRKRSKK ALFGDECSAF DALQTLADLS LMMPDTTADT EPSAKVKEEN  420
LDVMDKSKMK GNHSVVGAGI SASKTSKTGK ASGNNVGPIP EGEGIQGSNN GNRKRKQKSS  480
PFKISSKDED SNDSRVNDTP KTKATDDGKS SFGKVKRSPH NAGLAKSSKI SKPLDHHSSS  540
STDHKREDGD YALSTTQVPS INPISLPTKM RSRRKMDLLK SQRDSKIADN ILIDQLNEQH  600
SNCLSWHKLR RWCVFEWLYS AIDFPWFAKC EFVEYLNHVG LGHIPRLTRV EWGVIRSSLG  660
RPRRFSAQFL KEEKHKLNQY RESVRKHYAE LRAGTREGLP TDLARPLSVG QRVIAIHPKT  720
REIHDGSVLT VDYSRCRVQF DRPELGVEFV MDIECMPLNP VENMPANLSR HGVTLDKIFG  780
NLNEVKINGL LKEAKIEDYI KSTSNDKLES TDGSVFISPS THHINKLIKQ AKVDLGCSNL  840
RTKFGLNETV GIQQEASSQL SVLAQIQAKE ADVHALSELS RALDKKEVVV SELKRLNDEV  900
LENQINGDNL LKDSENFKKQ YAAVLLQLNE VNEQVSSALY SLRQRNTYQG TSPLMFLKPV  960
HDLGDPCSHA QEPGSHVAEI VGSSRAKART MIDEAMQAIL SLKKRESNLE NIEEAIDFVS  1020
NKLSVDDLAL PTVKSTSADT SNATPVSQNH FNAGASNPSA ANYVVGSKSN SPSDKPEVEI  1080
PSELIAHCVA TLLMIQKCTE RQFPPADVAQ VLDSAVNSLQ PCCPQNLPLY AEIQKCMGII  1140
RSQILALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	473	503	RKRKQKSSPFKISSKDEDSNDSRVNDTPKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein