PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973710.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1160aa MW: 128883 Da PI: 9.004

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.3	1.7e-08	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ +E e++++a +++G++ Wk++a+ + +R+ +++ XP_022973710.1 46 QWSRDEVEQFYEAYRKYGKD-WKKVAAAVR-NRSTEMV 81 6***************99.*****.98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1160 aa Download sequence
MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR 60 KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLRDSES 120 EQESNEDSGA TRKPQKRLRG KSRNNNSKGL DAHSSQSQSL PTNYGCLSLL KKRRSGIKPH 180 AVGKRTPRVP VSYSYDKDSR ERIFSPSRHT SKLKVDDPND DDVAHEIALV LTEASQRDGS 240 PQLSQTPNPK IEGHVLSPIR NDRMRSESDM MSTKFRCSEM DEGGCELSLG STGADNADYD 300 QGKNTREIQR KGKRYYGKKA EVEESMYNHL DDIKEACSGT EEGQKSGSLR GKLETEDFDV 360 KSVRTSFKGP RKRSKKALFG DECSAFDALQ TLADLSLMMP DTTADTEPSA KVKEENLDVM 420 DKSKMKGNHS VVGAGISASK TSKTGKASGN NVGPIPEGEG IQGSNNGNRK RKQKSSPFKI 480 SSKDEDSNDS RVNDTPKTKA TDDGKSSFGK VKRSPHNAGL AKSSKISKPL DHHSSSSTDH 540 KREDGDYALS TTQVPSINPI SLPTKMRSRR KMDLLKSQRD SKIADNILID QLNVTAHSLD 600 DRPHDLKEQH SNCLSWHKLR RWCVFEWLYS AIDFPWFAKC EFVEYLNHVG LGHIPRLTRV 660 EWGVIRSSLG RPRRFSAQFL KEEKHKLNQY RESVRKHYAE LRAGTREGLP TDLARPLSVG 720 QRVIAIHPKT REIHDGSVLT VDYSRCRVQF DRPELGVEFV MDIECMPLNP VENMPANLSR 780 HGVTLDKIFG NLNEVKINGL LKEAKIEDYI KSTSNDKLES TDGSVFISPS THHINKLIKQ 840 AKVDLGCSNL RTKFGLNETV GIQQEASSQL SVLAQIQAKE ADVHALSELS RALDKKEVVV 900 SELKRLNDEV LENQINGDNL LKDSENFKKQ YAAVLLQLNE VNEQVSSALY SLRQRNTYQG 960 TSPLMFLKPV HDLGDPCSHA QEPGSHVAEI VGSSRAKART MIDEAMQAIL SLKKRESNLE 1020 NIEEAIDFVS NKLSVDDLAL PTVKSTSADT SNATPVSQNH FNAGASNPSA ANYVVGSKSN 1080 SPSDKPEVEI PSELIAHCVA TLLMIQKCTE RQFPPADVAQ VLDSAVNSLQ PCCPQNLPLY 1140 AEIQKCMGII RSQILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1160 aa Download sequence

MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR  60
KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLRDSES  120
EQESNEDSGA TRKPQKRLRG KSRNNNSKGL DAHSSQSQSL PTNYGCLSLL KKRRSGIKPH  180
AVGKRTPRVP VSYSYDKDSR ERIFSPSRHT SKLKVDDPND DDVAHEIALV LTEASQRDGS  240
PQLSQTPNPK IEGHVLSPIR NDRMRSESDM MSTKFRCSEM DEGGCELSLG STGADNADYD  300
QGKNTREIQR KGKRYYGKKA EVEESMYNHL DDIKEACSGT EEGQKSGSLR GKLETEDFDV  360
KSVRTSFKGP RKRSKKALFG DECSAFDALQ TLADLSLMMP DTTADTEPSA KVKEENLDVM  420
DKSKMKGNHS VVGAGISASK TSKTGKASGN NVGPIPEGEG IQGSNNGNRK RKQKSSPFKI  480
SSKDEDSNDS RVNDTPKTKA TDDGKSSFGK VKRSPHNAGL AKSSKISKPL DHHSSSSTDH  540
KREDGDYALS TTQVPSINPI SLPTKMRSRR KMDLLKSQRD SKIADNILID QLNVTAHSLD  600
DRPHDLKEQH SNCLSWHKLR RWCVFEWLYS AIDFPWFAKC EFVEYLNHVG LGHIPRLTRV  660
EWGVIRSSLG RPRRFSAQFL KEEKHKLNQY RESVRKHYAE LRAGTREGLP TDLARPLSVG  720
QRVIAIHPKT REIHDGSVLT VDYSRCRVQF DRPELGVEFV MDIECMPLNP VENMPANLSR  780
HGVTLDKIFG NLNEVKINGL LKEAKIEDYI KSTSNDKLES TDGSVFISPS THHINKLIKQ  840
AKVDLGCSNL RTKFGLNETV GIQQEASSQL SVLAQIQAKE ADVHALSELS RALDKKEVVV  900
SELKRLNDEV LENQINGDNL LKDSENFKKQ YAAVLLQLNE VNEQVSSALY SLRQRNTYQG  960
TSPLMFLKPV HDLGDPCSHA QEPGSHVAEI VGSSRAKART MIDEAMQAIL SLKKRESNLE  1020
NIEEAIDFVS NKLSVDDLAL PTVKSTSADT SNATPVSQNH FNAGASNPSA ANYVVGSKSN  1080
SPSDKPEVEI PSELIAHCVA TLLMIQKCTE RQFPPADVAQ VLDSAVNSLQ PCCPQNLPLY  1140
AEIQKCMGII RSQILALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	469	499	RKRKQKSSPFKISSKDEDSNDSRVNDTPKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein