PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973709.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1164aa MW: 129446 Da PI: 9.0682

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.3	1.7e-08	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ +E e++++a +++G++ Wk++a+ + +R+ +++ XP_022973709.1 46 QWSRDEVEQFYEAYRKYGKD-WKKVAAAVR-NRSTEMV 81 6***************99.*****.98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1164 aa Download sequence
MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR 60 KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLMRFQR 120 DSESEQESNE DSGATRKPQK RLRGKSRNNN SKGLDAHSSQ SQSLPTNYGC LSLLKKRRSG 180 IKPHAVGKRT PRVPVSYSYD KDSRERIFSP SRHTSKLKVD DPNDDDVAHE IALVLTEASQ 240 RDGSPQLSQT PNPKIEGHVL SPIRNDRMRS ESDMMSTKFR CSEMDEGGCE LSLGSTGADN 300 ADYDQGKNTR EIQRKGKRYY GKKAEVEESM YNHLDDIKEA CSGTEEGQKS GSLRGKLETE 360 DFDVKSVRTS FKGPRKRSKK ALFGDECSAF DALQTLADLS LMMPDTTADT EPSAKVKEEN 420 LDVMDKSKMK GNHSVVGAGI SASKTSKTGK ASGNNVGPIP EGEGIQGSNN GNRKRKQKSS 480 PFKISSKDED SNDSRVNDTP KTKATDDGKS SFGKVKRSPH NAGLAKSSKI SKPLDHHSSS 540 STDHKREDGD YALSTTQVPS INPISLPTKM RSRRKMDLLK SQRDSKIADN ILIDQLNVTA 600 HSLDDRPHDL KEQHSNCLSW HKLRRWCVFE WLYSAIDFPW FAKCEFVEYL NHVGLGHIPR 660 LTRVEWGVIR SSLGRPRRFS AQFLKEEKHK LNQYRESVRK HYAELRAGTR EGLPTDLARP 720 LSVGQRVIAI HPKTREIHDG SVLTVDYSRC RVQFDRPELG VEFVMDIECM PLNPVENMPA 780 NLSRHGVTLD KIFGNLNEVK INGLLKEAKI EDYIKSTSND KLESTDGSVF ISPSTHHINK 840 LIKQAKVDLG CSNLRTKFGL NETVGIQQEA SSQLSVLAQI QAKEADVHAL SELSRALDKK 900 EVVVSELKRL NDEVLENQIN GDNLLKDSEN FKKQYAAVLL QLNEVNEQVS SALYSLRQRN 960 TYQGTSPLMF LKPVHDLGDP CSHAQEPGSH VAEIVGSSRA KARTMIDEAM QAILSLKKRE 1020 SNLENIEEAI DFVSNKLSVD DLALPTVKST SADTSNATPV SQNHFNAGAS NPSAANYVVG 1080 SKSNSPSDKP EVEIPSELIA HCVATLLMIQ KCTERQFPPA DVAQVLDSAV NSLQPCCPQN 1140 LPLYAEIQKC MGIIRSQILA LIPT

Sequence ? help Back to Top

Protein Sequence Length: 1164 aa Download sequence

MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR  60
KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLMRFQR  120
DSESEQESNE DSGATRKPQK RLRGKSRNNN SKGLDAHSSQ SQSLPTNYGC LSLLKKRRSG  180
IKPHAVGKRT PRVPVSYSYD KDSRERIFSP SRHTSKLKVD DPNDDDVAHE IALVLTEASQ  240
RDGSPQLSQT PNPKIEGHVL SPIRNDRMRS ESDMMSTKFR CSEMDEGGCE LSLGSTGADN  300
ADYDQGKNTR EIQRKGKRYY GKKAEVEESM YNHLDDIKEA CSGTEEGQKS GSLRGKLETE  360
DFDVKSVRTS FKGPRKRSKK ALFGDECSAF DALQTLADLS LMMPDTTADT EPSAKVKEEN  420
LDVMDKSKMK GNHSVVGAGI SASKTSKTGK ASGNNVGPIP EGEGIQGSNN GNRKRKQKSS  480
PFKISSKDED SNDSRVNDTP KTKATDDGKS SFGKVKRSPH NAGLAKSSKI SKPLDHHSSS  540
STDHKREDGD YALSTTQVPS INPISLPTKM RSRRKMDLLK SQRDSKIADN ILIDQLNVTA  600
HSLDDRPHDL KEQHSNCLSW HKLRRWCVFE WLYSAIDFPW FAKCEFVEYL NHVGLGHIPR  660
LTRVEWGVIR SSLGRPRRFS AQFLKEEKHK LNQYRESVRK HYAELRAGTR EGLPTDLARP  720
LSVGQRVIAI HPKTREIHDG SVLTVDYSRC RVQFDRPELG VEFVMDIECM PLNPVENMPA  780
NLSRHGVTLD KIFGNLNEVK INGLLKEAKI EDYIKSTSND KLESTDGSVF ISPSTHHINK  840
LIKQAKVDLG CSNLRTKFGL NETVGIQQEA SSQLSVLAQI QAKEADVHAL SELSRALDKK  900
EVVVSELKRL NDEVLENQIN GDNLLKDSEN FKKQYAAVLL QLNEVNEQVS SALYSLRQRN  960
TYQGTSPLMF LKPVHDLGDP CSHAQEPGSH VAEIVGSSRA KARTMIDEAM QAILSLKKRE  1020
SNLENIEEAI DFVSNKLSVD DLALPTVKST SADTSNATPV SQNHFNAGAS NPSAANYVVG  1080
SKSNSPSDKP EVEIPSELIA HCVATLLMIQ KCTERQFPPA DVAQVLDSAV NSLQPCCPQN  1140
LPLYAEIQKC MGIIRSQILA LIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	473	503	RKRKQKSSPFKISSKDEDSNDSRVNDTPKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein