PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973679.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 777aa MW: 86909.2 Da PI: 6.7299

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	114.9	4.5e-36	131	207	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv gCe+d+se+k yhrrh+vC +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k XP_022973679.1 131 RCQVFGCEVDISELKGYHRRHRVCLRCANATAVAIDGETKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKP 207 6************************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 777 aa Download sequence
MEHPPPSPLP EPLYGAAAEM DLQLPIADDS SAVLWDLGDL LDLAGDDQFS LPLEHDNLPS 60 DSSHPLEIPS ETLPSNSDRI RKRDPRLTCP NFLAGRVPCA CPEIDAMLEE EAAASGKKRA 120 RTSRVAAGTV RCQVFGCEVD ISELKGYHRR HRVCLRCANA TAVAIDGETK RYCQQCGKFH 180 LLSDFDEGKR SCRRKLERHN NRRRRKPADS TVAMESDRAG MHLEDVSCDG DAGKDDIVFN 240 NQTVQKEVVH LESEDGMVTP TVCSAPDLQS NIESGLTFMA MGEAQVDGGK DNFKSLASSY 300 CDNKSTYSSM CPTGRISFKL YDWNPAEFPR RLRLQIFEWL ANMPVELEGY IRPGCVILTA 360 FVAMPKFMWI KLLEDPTTHV HNFVVARGRP LWGRGSLLVY LNNMIFCAVE GGSVMKIEMD 420 MEAPRLHYVH PTCFEAGKPM EFVACGSHLQ QPKFRSLVSF DGKYLAHVQS FVIPHCQKEG 480 DTKQSNHQLF KICIPHTEHD LFGPAFVEVE NQSGLSNFIP LLIGDSETCS EMKTIQERLD 540 MSLPVEATGS SHKYCEHSSL RQKVYSELVM DISWLLKKPS SEPLQRIMNS SQIQRFTRLL 600 KFLISIDSTV ILGRVLEHLK IVMGNVDSNV AANGFSYPDL RYFEKYLDYA TVLQLNLRRD 660 QVSQSFSKNK LASVDPGTGQ KMESEESDHF RAASGSTSTS SVETRPLLNE KLREKIMVQE 720 NSRKSCGLLF SGTVFRRQTA LFAITFAAVC LGICAALVHS HKVGEFAVSI RRCVINT

Sequence ? help Back to Top

Protein Sequence Length: 777 aa Download sequence

MEHPPPSPLP EPLYGAAAEM DLQLPIADDS SAVLWDLGDL LDLAGDDQFS LPLEHDNLPS  60
DSSHPLEIPS ETLPSNSDRI RKRDPRLTCP NFLAGRVPCA CPEIDAMLEE EAAASGKKRA  120
RTSRVAAGTV RCQVFGCEVD ISELKGYHRR HRVCLRCANA TAVAIDGETK RYCQQCGKFH  180
LLSDFDEGKR SCRRKLERHN NRRRRKPADS TVAMESDRAG MHLEDVSCDG DAGKDDIVFN  240
NQTVQKEVVH LESEDGMVTP TVCSAPDLQS NIESGLTFMA MGEAQVDGGK DNFKSLASSY  300
CDNKSTYSSM CPTGRISFKL YDWNPAEFPR RLRLQIFEWL ANMPVELEGY IRPGCVILTA  360
FVAMPKFMWI KLLEDPTTHV HNFVVARGRP LWGRGSLLVY LNNMIFCAVE GGSVMKIEMD  420
MEAPRLHYVH PTCFEAGKPM EFVACGSHLQ QPKFRSLVSF DGKYLAHVQS FVIPHCQKEG  480
DTKQSNHQLF KICIPHTEHD LFGPAFVEVE NQSGLSNFIP LLIGDSETCS EMKTIQERLD  540
MSLPVEATGS SHKYCEHSSL RQKVYSELVM DISWLLKKPS SEPLQRIMNS SQIQRFTRLL  600
KFLISIDSTV ILGRVLEHLK IVMGNVDSNV AANGFSYPDL RYFEKYLDYA TVLQLNLRRD  660
QVSQSFSKNK LASVDPGTGQ KMESEESDHF RAASGSTSTS SVETRPLLNE KLREKIMVQE  720
NSRKSCGLLF SGTVFRRQTA LFAITFAAVC LGICAALVHS HKVGEFAVSI RRCVINT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	193	205	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein