PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972933.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 516aa MW: 57477.5 Da PI: 6.012

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.9	9.2e-07	262	283	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H XP_022972933.1 262 FCAICGKGFKRDANLRMHMRGH 283 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MDPEDSLCSS EVWTKSSSFP NIDAQQHEQK WVDTSILDYA MDQPFQEYEE QTELKASLTC 60 NSNQQIGILN KDSDQMNAAI LGSKVQDWDP RAMLSNLSFL EQKVHQLQEL VHLIIGRRSQ 120 VLGRPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH NFSAAVPLVG QLEPPLDRVL 180 FASESGTNNG VVQSQHGDGT KLPEVPTRID ESSKYGKEQN MSVEEHELKD EEDADESENL 240 PPGSYEILQL EKEEILAPHT HFCAICGKGF KRDANLRMHM RGHGDEYKTA AALAKPHKEP 300 SYETMLIKRY SCPFTGCKRN KDHKKFQPLK TILCVKNHYK RTHCDKSFTC SKCNSKKFSV 360 IADLKTHEKH CGKDKWLCSC GTTFSRKDKL FGHIALFQGH TPAIPLEESK GTAMSCDRGE 420 RYETANKLGS INFSFGSIAS GGSSVETIAA ADAKGGVDDP LTYYSPLNFD PCNFGGYHEF 480 PRPPFENAEN AFPFLIPTSS NYNQKSGAES SCNNLE

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MDPEDSLCSS EVWTKSSSFP NIDAQQHEQK WVDTSILDYA MDQPFQEYEE QTELKASLTC  60
NSNQQIGILN KDSDQMNAAI LGSKVQDWDP RAMLSNLSFL EQKVHQLQEL VHLIIGRRSQ  120
VLGRPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH NFSAAVPLVG QLEPPLDRVL  180
FASESGTNNG VVQSQHGDGT KLPEVPTRID ESSKYGKEQN MSVEEHELKD EEDADESENL  240
PPGSYEILQL EKEEILAPHT HFCAICGKGF KRDANLRMHM RGHGDEYKTA AALAKPHKEP  300
SYETMLIKRY SCPFTGCKRN KDHKKFQPLK TILCVKNHYK RTHCDKSFTC SKCNSKKFSV  360
IADLKTHEKH CGKDKWLCSC GTTFSRKDKL FGHIALFQGH TPAIPLEESK GTAMSCDRGE  420
RYETANKLGS INFSFGSIAS GGSSVETIAA ADAKGGVDDP LTYYSPLNFD PCNFGGYHEF  480
PRPPFENAEN AFPFLIPTSS NYNQKSGAES SCNNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein