PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972866.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 298aa    MW: 32181.1 Da    PI: 10.049
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.14.9e-14102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + +q G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022972866.1 102 PWTEEEHKLFLIGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MRSITAAVNE SAATEIGGGG PGVIMLFGVR VVVDSMRKSV SLNNLSQYEQ PHKAADVIAN  60
DNMNDPVSVN HKDVVAAGYA SADDAVPNAC GNRERERKRG VPWTEEEHKL FLIGLQQVGK  120
GDWRGISRNF VKTRTPTQVA SHAQKYYLRR SNLNRRRRRS SLFDITTDTV TAAPMVENSV  180
QLQETASQSH SLTPSNQLKI SKNNVIPAVQ TLPFSFGPTP FATPTKNPME KGGGPGEVST  240
EKDGPLKLGL TNSISATESS ALSLRLALTS EQREASTRLS TFQSMPSFNN GEGIISAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-60MYB_related family protein