PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972844.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 311aa    MW: 35009.5 Da    PI: 7.0474
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972844.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407.1e-13134180455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +hn  +r+RRdriN+++  L++l+P+       K++ a+ L  +++Y+k+Lq
  XP_022972844.1 134 NHNRSDRKRRDRINQKMKDLQKLVPNG-----SKMDRASLLDDTIQYLKQLQ 180
                     7*************************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MSMSHWTLPN WNPMPNYERP CARGDDQEAA MDAHVEVLFQ TPSTNHSWSQ SDDTLESIVH  60
SSLSRKRTRS NPDCKNEALM SWTSMESHGS FKTEDSVEDL AQDDVSVMHK EDDHNMKGKA  120
DGSCSIGRTR AAINHNRSDR KRRDRINQKM KDLQKLVPNG SKMDRASLLD DTIQYLKQLQ  180
AQVQFMYSIR SIVPQMVTPL GIQQQQLQMS LLAAHMGLLN TDSKAPSSSS FPCAAAFPPP  240
PFLLPSINST TKPKSNLSTS AFVPPTDPFC TFLAQSMDMD FYSKMVTLYC QEVNKTPRQA  300
GKFEGIKEDM H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139144DRKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.12e-24bHLH family protein