PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972813.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 380aa MW: 41605.6 Da PI: 8.1815

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972813.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.9	5.3e-34	40	94	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m++ gLtl+h+kSHLQkYRl XP_022972813.1 40 KPRLKWTPDLHDRFVEAVNQLGGPDKATPKTVMKIMGISGLTLYHLKSHLQKYRL 94 79****************************************************8 PP
2	Myb_DNA-binding	64.8	1.7e-20	42	93	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg+ t+kt+++ mg g+tl+++ks++qky+ XP_022972813.1 42 RLKWTPDLHDRFVEAVNQLGGPdkaTPKTVMKIMGiSGLTLYHLKSHLQKYR 93 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL 60 GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGMGWRVGT 120 VAVSVDQRLG EANGAARTNS IAVAPQASSQ PNNLQISETI QMQIEVQKRL HEQLEVQRHL 180 QLRIEAQGKY LQTVLEKAQE TLGRQNLGTV GLEAAKVQLS ELVSKVSTQC LTAAFPELHH 240 QQQQQNQPQR LCPQQSQPPD CSMDSCLTSC EGSKDQQNSH LALQPYAIAT HRGSSAADQL 300 HGLSMGMGLV QGEKGEGYNG YSPSEGQRFG STRKEGVEKE KVVEGVFRYR MDLNAGEDQL 360 SDNDHAASNT CKMFDLNGFS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL  60
GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGMGWRVGT  120
VAVSVDQRLG EANGAARTNS IAVAPQASSQ PNNLQISETI QMQIEVQKRL HEQLEVQRHL  180
QLRIEAQGKY LQTVLEKAQE TLGRQNLGTV GLEAAKVQLS ELVSKVSTQC LTAAFPELHH  240
QQQQQNQPQR LCPQQSQPPD CSMDSCLTSC EGSKDQQNSH LALQPYAIAT HRGSSAADQL  300
HGLSMGMGLV QGEKGEGYNG YSPSEGQRFG STRKEGVEKE KVVEGVFRYR MDLNAGEDQL  360
SDNDHAASNT CKMFDLNGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	1e-104	G2-like family protein