PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972544.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 80aa    MW: 9011.09 Da    PI: 7.6118
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.43.7e-091157347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+ E + + +a + +  +   +W  +a+ +g g+t+ ++k ++q +
   XP_022972544.1 11 AWTARENKAFEKALAVFDQDtpdRWVNVAKAIG-GKTEDEVKRHYQLL 57
                     8*****************99*************.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MASMSAHGSS AWTARENKAF EKALAVFDQD TPDRWVNVAK AIGGKTEDEV KRHYQLLVND  60
VKHIESGEIN FPYRSSTRLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.15e-31MYB_related family protein