PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972484.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 318aa MW: 35728.5 Da PI: 6.6034

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.6	1.1e-13	157	204	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++N++f L ++P + kK++Ka++L A++Y+k+Lq XP_022972484.1 157 QDHILAERKRREKLNQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 204 57999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MERSSRVVFS EMGMEDNGFV NQWQKSSIDE LGVPLAAAFG EDLQHSYAQS NIDQKATLNC 60 SHNAILGYVK QLKSDGWSSY QTNNHSSNSP VVSYPTASVS ASNYTNQMDF TRPKEEVVCP 120 RSISNLPSDM LVSQDTLRHP SHGTKSTSTN SRIPQAQDHI LAERKRREKL NQRFIALSAI 180 VPGLKKMDKA SVLGDAIKYL KQLQEKVKIL EEQTRRKDIE SVVFINTSNE DDDALPEIEA 240 RLCDKNVLIR IHCEKKKDVI ENTVAEIEKL HLTIVNSSVM SFGSLALDIT IIAQMDNEFC 300 LTLKDLVKKL QSTLHSFE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	168	ERKRRE
2	164	169	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-57	bHLH family protein