PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972249.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 288aa    MW: 31688.8 Da    PI: 8.5746
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.6e-18210244135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C++  Tp+WR gp g+ktLCnaCG++y+k g+
  XP_022972249.1 210 CSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGR 244
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDYQPKMVSV NSEYEQDDCS KLKSELSSTL DDDLCSLQMT TMEVDGNLEW LSAFVEECLS  60
AKGSSLPLPP PQLSTHLNNP PPPPNSLSHP IPSSSDSPFS HFSAVPSKAR SKRRQAPANT  120
SICPLIGQHH LDQLNLLPNK QSLQLTSSSA DILLLQQTYW LADSELLLPH KARGGGEERE  180
KKVEMDQRDT TVKKSLGLQQ KQGAGSGRRC SHCQAQRTPQ WRGGPLGPKT LCNACGVRYK  240
KSGRLVPEYR PANSPTFVSF LHSNSHKRVM EMRMINASSS TSTAFSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-34GATA family protein