PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972028.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 323aa    MW: 35440.6 Da    PI: 6.935
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.89.2e-33163221159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s++prsYYrCt+++C vkk+vers++d ++v++tYeg+H+h+
  XP_022972028.1 163 LDDGYRWRKYGQKTVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQ 221
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEKKFEDSLM GSATSTGIYS QTVFSDEFPV GGSGFSGVFD LPCDDHKASC CSSSSFDLFG  60
GGIGFHDFYN PSSIFDLLST TVPPLQPPLS SPSSTVPESS EVLNAPPTPN SSSVSNSSSN  120
EAAPIEEVDK NAKTSKVLKP KKNQKKQREP RFAFMTKSDI DHLDDGYRWR KYGQKTVKNS  180
PYPRSYYRCT TSQCGVKKRV ERSSSDHSIV ITTYEGQHTH QSPVMPRGSI RILSESTNCL  240
VADHDVATTG ILFQHNIPGQ PFMYNPPQPF LTNESSFLSP RPPPPSLSPP LLSSRASLLQ  300
DNGLLQDLVP LQVRKEPKDE QNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.12e-46WRKY family protein