PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022971595.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 703aa MW: 78086 Da PI: 5.1031

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022971595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.4	1.6e-05	529	566	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr+++P+ a K s + Lek+v ++ +Lq XP_022971595.1 529 RQLIQDRIKELRQIIPNgA------KCSIVGLLEKTVMHMLYLQ 566 7789***********66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
METSLKQLLE SLCNNSQWIY AVFWKIKYQN PSILTWEDGY CNCSKLENHM GSMTECRMIN 60 EREEHVSSYY GTNIHNGDSG GCSVGAAVAD MFYLQYALGE GTVGSVASSG NHNWVVLENL 120 FTSDLLSASI YEGPTEWLLQ YASGIKTILL VPVLPFGVLQ LGSLQMLTEN LSMVGYIKDR 180 VSAINSVDGN ATSVASDKGV WPLCASVVPS PFGSLDDPTN VTSCMFQAEN HGAIDDVKPL 240 VSTFNQFVTN QDVLTVSRRT RPETLHSEKG HKGELEGTTM EEPFASLYQS IRDSEVEFSD 300 LFCLEPLLAP CSQLRNNETG LFEGNPHSYH SCSVDNVVGQ QFGHNLVSKK EYGSADNFFS 360 FPDDCELLEA LGSALPAHKH TNELAHDSSS SIKNTTSSLM CSSDFKEGDL EHLLEAMITA 420 DDTFSNNTIN ARISSPVVGR SGLSAKTCCQ SESSAEVVDD PALWIFPESK VTETGRKNLT 480 SLSTSNSLVV SAREENNCDI TKHKNGMKSS NFRRRIKVTS KARQRPRDRQ LIQDRIKELR 540 QIIPNGAKCS IVGLLEKTVM HMLYLQQATD QAEKLKQLAQ EGSNSEYSTV LENEDSQPNG 600 ASWAWAFDIG SDLQVCPIVV EDLEYKGHML IKILCDDMGL FLEISRILRD LELTILKGVI 660 ERHSNNSWAH FIVEAPRGFH RMDVFWPLLH LIQRKRNPVS GRI

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

METSLKQLLE SLCNNSQWIY AVFWKIKYQN PSILTWEDGY CNCSKLENHM GSMTECRMIN  60
EREEHVSSYY GTNIHNGDSG GCSVGAAVAD MFYLQYALGE GTVGSVASSG NHNWVVLENL  120
FTSDLLSASI YEGPTEWLLQ YASGIKTILL VPVLPFGVLQ LGSLQMLTEN LSMVGYIKDR  180
VSAINSVDGN ATSVASDKGV WPLCASVVPS PFGSLDDPTN VTSCMFQAEN HGAIDDVKPL  240
VSTFNQFVTN QDVLTVSRRT RPETLHSEKG HKGELEGTTM EEPFASLYQS IRDSEVEFSD  300
LFCLEPLLAP CSQLRNNETG LFEGNPHSYH SCSVDNVVGQ QFGHNLVSKK EYGSADNFFS  360
FPDDCELLEA LGSALPAHKH TNELAHDSSS SIKNTTSSLM CSSDFKEGDL EHLLEAMITA  420
DDTFSNNTIN ARISSPVVGR SGLSAKTCCQ SESSAEVVDD PALWIFPESK VTETGRKNLT  480
SLSTSNSLVV SAREENNCDI TKHKNGMKSS NFRRRIKVTS KARQRPRDRQ LIQDRIKELR  540
QIIPNGAKCS IVGLLEKTVM HMLYLQQATD QAEKLKQLAQ EGSNSEYSTV LENEDSQPNG  600
ASWAWAFDIG SDLQVCPIVV EDLEYKGHML IKILCDDMGL FLEISRILRD LELTILKGVI  660
ERHSNNSWAH FIVEAPRGFH RMDVFWPLLH LIQRKRNPVS GRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-43	bHLH family protein