PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970637.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 603aa MW: 65928.3 Da PI: 8.2122

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.6	5.2e-33	268	325	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++C++kkkvers d++++ei+Y+g+Hnh+k XP_022970637.1 268 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCSTKKKVERSL-DGQITEIVYKGSHNHPK 325 8**************************************.*************85 PP
2	WRKY	105.6	2.7e-33	441	499	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d+++v++tYeg+Hnh+ XP_022970637.1 441 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDQRAVITTYEGKHNHD 499 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MRLPFLEPSS SPFSFFNFLF SPFLFTISSS SSSSSSSSLM ASSSGSLDTS GNSHPSFTFS 60 SHPFMTTSYS DLLASGFDDP PSSAAPHGSL RSSTTGVPKF KSLPPPSLPL SPPPLSPSSF 120 FAIPPGLSPA ELLDSPVLLS ASHPLPSPTT GSFPSQSLNW KSSYGYNQQS IKEENKYLSN 180 FSFQTQSSKP PPSSFQPSST TAPMSWSFQE QGKKQDGFPS ENNMVKQSFS PEYGIVQNQS 240 QINGGGQLQS DYGNNYPQQS QTVNRRSDDG YNWRKYGQKQ VKGSENPRSY YKCTFPSCST 300 KKKVERSLDG QITEIVYKGS HNHPKPQSTR RSSLSSAGSS LSMVVSNPAT NEMADQSFTT 360 QGSAQFDGVA TPENSSISIG DDDFDRSSQK SKSGGDDYDE VEPEAKRWRR DENNEGMSAA 420 GSRTVREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNP GCPVRKHVER 480 ASHDQRAVIT TYEGKHNHDV PPARGSGSHS LSRAFPNNDP PATAIRPSAV AHQSNNGGHQ 540 SLQTAFAVEM VQNPHGFSFP EFGNSMGMGS GSYMNQNQPN HNLFPRAKEE PRDHDMFIQS 600 LLC

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MRLPFLEPSS SPFSFFNFLF SPFLFTISSS SSSSSSSSLM ASSSGSLDTS GNSHPSFTFS  60
SHPFMTTSYS DLLASGFDDP PSSAAPHGSL RSSTTGVPKF KSLPPPSLPL SPPPLSPSSF  120
FAIPPGLSPA ELLDSPVLLS ASHPLPSPTT GSFPSQSLNW KSSYGYNQQS IKEENKYLSN  180
FSFQTQSSKP PPSSFQPSST TAPMSWSFQE QGKKQDGFPS ENNMVKQSFS PEYGIVQNQS  240
QINGGGQLQS DYGNNYPQQS QTVNRRSDDG YNWRKYGQKQ VKGSENPRSY YKCTFPSCST  300
KKKVERSLDG QITEIVYKGS HNHPKPQSTR RSSLSSAGSS LSMVVSNPAT NEMADQSFTT  360
QGSAQFDGVA TPENSSISIG DDDFDRSSQK SKSGGDDYDE VEPEAKRWRR DENNEGMSAA  420
GSRTVREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNP GCPVRKHVER  480
ASHDQRAVIT TYEGKHNHDV PPARGSGSHS LSRAFPNNDP PATAIRPSAV AHQSNNGGHQ  540
SLQTAFAVEM VQNPHGFSFP EFGNSMGMGS GSYMNQNQPN HNLFPRAKEE PRDHDMFIQS  600
LLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-107	WRKY family protein