PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970519.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 682aa MW: 75643.1 Da PI: 9.4109

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	574	623	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022970519.1 574 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 623 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MVLQKRLDYG FHGYQVPTMP RATRSVRKRS LCRKGTEGGQ MRAFDLLATV ADKLLHGTDG 60 PTTTTTDTST EKDRYAVMNK ELDANSLLKV EPSDRGSCDQ GFVSELVLSG HEKKCDLNGC 120 LPQHDEDSPP QLVSVVTNFD KSKEMGNLAS EVHVGSPRSK ESDNCELDGK SKVIVKYELH 180 KTEEVLTGTQ DQYDSCKRED PVIWDQKAHV LGNSNGCGKM TQDKQIIQNS SFATQNNVKL 240 VDRDDDEISS GCTHPVSSIK SFRTVPSSRD RRIKKVSASK SWKVVPRCRD ESLSKTDGIW 300 KSMFRSKSSH DSCRRQKSQM NIPFKKRKFF DCSSSVSNSD GGINSEGLSD STGKVFNSDI 360 SGRSCSASGN GHHKSFPSKD SHVKIRIKSF RVPELFIEIS ETATVGSLKR TVMEAVTAVL 420 GGGIRVGVLL QGKKVRDDNK TLFQTGISHD NQLDSLGFAL EPNPSRTPLA LCQEDSPCIL 480 PCDAPEPLTR YSPDASADHP GSSSVLPEPH GDSLGHFIQS DHDSAPSPTN TSNHKSTTDS 540 KALVNVPAMT VEALTVVPMH RKSKRSEVAQ RRIRRPFSVA EVEALVQAVE KLGTGRWRDV 600 KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLSA HAYWSKQQAK 660 YQLKRQPETT TPMNKKTQQS WG

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MVLQKRLDYG FHGYQVPTMP RATRSVRKRS LCRKGTEGGQ MRAFDLLATV ADKLLHGTDG  60
PTTTTTDTST EKDRYAVMNK ELDANSLLKV EPSDRGSCDQ GFVSELVLSG HEKKCDLNGC  120
LPQHDEDSPP QLVSVVTNFD KSKEMGNLAS EVHVGSPRSK ESDNCELDGK SKVIVKYELH  180
KTEEVLTGTQ DQYDSCKRED PVIWDQKAHV LGNSNGCGKM TQDKQIIQNS SFATQNNVKL  240
VDRDDDEISS GCTHPVSSIK SFRTVPSSRD RRIKKVSASK SWKVVPRCRD ESLSKTDGIW  300
KSMFRSKSSH DSCRRQKSQM NIPFKKRKFF DCSSSVSNSD GGINSEGLSD STGKVFNSDI  360
SGRSCSASGN GHHKSFPSKD SHVKIRIKSF RVPELFIEIS ETATVGSLKR TVMEAVTAVL  420
GGGIRVGVLL QGKKVRDDNK TLFQTGISHD NQLDSLGFAL EPNPSRTPLA LCQEDSPCIL  480
PCDAPEPLTR YSPDASADHP GSSSVLPEPH GDSLGHFIQS DHDSAPSPTN TSNHKSTTDS  540
KALVNVPAMT VEALTVVPMH RKSKRSEVAQ RRIRRPFSVA EVEALVQAVE KLGTGRWRDV  600
KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLSA HAYWSKQQAK  660
YQLKRQPETT TPMNKKTQQS WG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-125	MYB_related family protein