PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970266.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 257aa MW: 29041.6 Da PI: 8.4681

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.1e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++ +G+ +W + +++ g++R++k+c++rw++yl XP_022970266.1 14 KGPWSPEEDAKLKAYIMNHGTAgNWISLPQKAGLNRCGKSCRLRWLNYL 62 79****************99***********************97 PP
2	Myb_DNA-binding	37.1	7.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022970266.1 69 GGFTDEEDRIICTLFCTIGSR-WSIIASQLP-GRTDNDIKNHWNS 111 569****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MGRSPCCDKA IVKKGPWSPE EDAKLKAYIM NHGTAGNWIS LPQKAGLNRC GKSCRLRWLN 60 YLRPNIKHGG FTDEEDRIIC TLFCTIGSRW SIIASQLPGR TDNDIKNHWN SKLKRKLIAM 120 EKKAQMGTMP SFHNHHQISS FPSQQLYQDS NFSSFETLIS SIPSNWSNIQ TKETSSNSLM 180 NNSLTYNNNP MVKQSSLGFG SEGSTCDGSY NQITSSGIMG FDQNHNYYYD LMNYQSQCCI 240 NGEAAQEHLG PNSFYQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-73	MYB family protein