PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969828.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 345aa MW: 38205.4 Da PI: 4.5502

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.4	3e-35	25	116	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++++isw+++g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k ll++ XP_022969828.1 25 FLTKTYQLVDDSAVDDFISWNDDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFRRGEKGLLRD 110 9***************************************************************99.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_022969828.1 111 IQRRKG 116 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MAPSTAEPIV ESGSGDSQRS IPTPFLTKTY QLVDDSAVDD FISWNDDGST FIVWRPAEFA 60 RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF RRGEKGLLRD IQRRKGTLSS 120 ATTTTAVSGP VLVAASPSVV AHVISPSNSA EEQVTSSNSS PMAFQRGTSC STTPELVGEN 180 ERLRKENMQL SHELTQLKGL CNNILSLMTN YASGHHHQLQ SVSVRDMKAL ELLPARQAMK 240 DDGAVSDGVQ EVRLKVEETT TASPAKRTAP KLFGVSIGVK RRREEEEEEE EEEEEEEVEA 300 MVGQNHVLSD EGETLWAINA EPLDENSENP DGSALPWLEL GTQCS

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MAPSTAEPIV ESGSGDSQRS IPTPFLTKTY QLVDDSAVDD FISWNDDGST FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF RRGEKGLLRD IQRRKGTLSS  120
ATTTTAVSGP VLVAASPSVV AHVISPSNSA EEQVTSSNSS PMAFQRGTSC STTPELVGEN  180
ERLRKENMQL SHELTQLKGL CNNILSLMTN YASGHHHQLQ SVSVRDMKAL ELLPARQAMK  240
DDGAVSDGVQ EVRLKVEETT TASPAKRTAP KLFGVSIGVK RRREEEEEEE EEEEEEEVEA  300
MVGQNHVLSD EGETLWAINA EPLDENSENP DGSALPWLEL GTQCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	2e-94	HSF family protein