PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969474.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 567aa MW: 63509 Da PI: 4.7505

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.7e-12	315	358	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N+++ +Lr l+Pk + K++Ka+iL A++++k+Lq XP_022969474.1 315 VAERKRRKKLNERLYNLRALVPKiS------KMDKASILGDAIDFVKELQ 358 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MQSLMERLRP LVGSKSWNYC VLWKLSQDQR CVEWMNCCCA GTENGQNGGE ELGFPVSQVI 60 PCRDTAYPHP RASSCDLLAQ LPCSVPLNSG VYIQTLLSNE PKWLLFSNTM DSTALDETAG 120 TRVLIPFPFG LVELFVAKHA SEDQHVIDFV TIQCSISVEQ EAIINSSNMD TSFSVDVNAT 180 NEIQSKPFVA DRNAVLKDPE IQFEAPGSAA PTLENANDSF LTDKQGNHYK FSAENEFQEV 240 DTMQGSLMNT SNIHVQLKEN SECKEQQGEE KDLVKHENGR SDSISDCSDQ IDDEDDAIAK 300 YRRRTGQGPQ SKNLVAERKR RKKLNERLYN LRALVPKISK MDKASILGDA IDFVKELQKQ 360 VKELQDELEE HTDDENGKTV VSGNNGNQNS VQLPEFLSQN DKAQNSYHMG VLGSGSILKQ 420 NHQDTEGTNN DKTQQMEPQV EVAQIDGNEF FVKVFCENKR GGFMRLMEAL NALGLEVTNA 480 NVTSYRGLVS NVFKVGKKDS EMVQADDVRD SLLEITKYPC RGWAEIVKAP ECIGSRMEPN 540 PHPHQHQTQN PFQDKAIINS RLHLLNE

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MQSLMERLRP LVGSKSWNYC VLWKLSQDQR CVEWMNCCCA GTENGQNGGE ELGFPVSQVI  60
PCRDTAYPHP RASSCDLLAQ LPCSVPLNSG VYIQTLLSNE PKWLLFSNTM DSTALDETAG  120
TRVLIPFPFG LVELFVAKHA SEDQHVIDFV TIQCSISVEQ EAIINSSNMD TSFSVDVNAT  180
NEIQSKPFVA DRNAVLKDPE IQFEAPGSAA PTLENANDSF LTDKQGNHYK FSAENEFQEV  240
DTMQGSLMNT SNIHVQLKEN SECKEQQGEE KDLVKHENGR SDSISDCSDQ IDDEDDAIAK  300
YRRRTGQGPQ SKNLVAERKR RKKLNERLYN LRALVPKISK MDKASILGDA IDFVKELQKQ  360
VKELQDELEE HTDDENGKTV VSGNNGNQNS VQLPEFLSQN DKAQNSYHMG VLGSGSILKQ  420
NHQDTEGTNN DKTQQMEPQV EVAQIDGNEF FVKVFCENKR GGFMRLMEAL NALGLEVTNA  480
NVTSYRGLVS NVFKVGKKDS EMVQADDVRD SLLEITKYPC RGWAEIVKAP ECIGSRMEPN  540
PHPHQHQTQN PFQDKAIINS RLHLLNE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	323	RRRTGQGPQSKNLVAERKRRKK
2	317	324	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-122	bHLH family protein