PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969209.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 477aa MW: 51197.2 Da PI: 8.8445

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.6e-31	240	298	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_022969209.1 240 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 298 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MNFFPADDKS RVLLDSKLAS RNRSPTKLDF NVNTGLNLLT TNSSSDQSMV DDGASPNPEE 60 KRAKNERAVL QAELERLKSE NLRLKDMLNQ VTSNYQALQM HLATLIQNQK AADAADPIEE 120 KSAAAQEKVR HGSGCNTNKL VPRQFMDLGL ATNANTDDLS MSSSDGRSGE QSRSPVTTGE 180 VASSKRHSPD TNWSSNNNNK VPKLGSSSSS SSAKDADQTE STMRKARVSV RARSEAPMIT 240 DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG CPVRKQVQRC AEDKTILITT YEGNHNHPLP 300 PAAMAMASTT SSAARMLLSG SMSSADGLMN PNFLARTLLP CSSSMATISA SAPFPTVTLD 360 LTQTPNPLFQ RPAAGHFPIS FAATPPQSFP QIFGHALYNQ SKFSGLQMSK DMEAPPPPPA 420 LQNPLADTLS AAIASDPNFI AALATAMTSL IGGSHHQKEN GNGSSNVDNN TTSNSQQ

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MNFFPADDKS RVLLDSKLAS RNRSPTKLDF NVNTGLNLLT TNSSSDQSMV DDGASPNPEE  60
KRAKNERAVL QAELERLKSE NLRLKDMLNQ VTSNYQALQM HLATLIQNQK AADAADPIEE  120
KSAAAQEKVR HGSGCNTNKL VPRQFMDLGL ATNANTDDLS MSSSDGRSGE QSRSPVTTGE  180
VASSKRHSPD TNWSSNNNNK VPKLGSSSSS SSAKDADQTE STMRKARVSV RARSEAPMIT  240
DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG CPVRKQVQRC AEDKTILITT YEGNHNHPLP  300
PAAMAMASTT SSAARMLLSG SMSSADGLMN PNFLARTLLP CSSSMATISA SAPFPTVTLD  360
LTQTPNPLFQ RPAAGHFPIS FAATPPQSFP QIFGHALYNQ SKFSGLQMSK DMEAPPPPPA  420
LQNPLADTLS AAIASDPNFI AALATAMTSL IGGSHHQKEN GNGSSNVDNN TTSNSQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-120	WRKY family protein