PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968606.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 467aa MW: 50673.3 Da PI: 8.021

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.6	1.2e-33	200	256	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers +++++ei+Y+geHnhe XP_022968606.1 200 DDGYNWRKYGQKQVKGSEFPRSYYKCTYPNCPVKKKVERSL-EGHITEIIYKGEHNHE 256 8**************************************.*************8 PP
2	WRKY	104.6	5.2e-33	377	435	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC+v+k+ver+++d+k+v++tYeg+Hnh+ XP_022968606.1 377 LDDGYRWRKYGQKTVKGNPYPRSYYKCTTLGCNVRKHVERASTDQKAVITTYEGKHNHD 435 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MGDDEDKLPP SSVPSPLKSK AFPLRPTINL PPRTSMESLL SGGPGLGLGF SPGPMTLVSS 60 FFSDSDDCKS FSQLLAGAMT SPVAVPPTAS ELKDSAGLPD SPGLFSPDQG TFGLTHQQAL 120 AQVTLQAVEA YSHKQIQAHS VAGSAASSKL LTVFPSEKAK DQPVPLQFLN SAVVSKESSD 180 ISQSDQRLVS SSCNADRPAD DGYNWRKYGQ KQVKGSEFPR SYYKCTYPNC PVKKKVERSL 240 EGHITEIIYK GEHNHERPQP NKRAKDVGNS NGYSSVHGNT DLYSQIKSGL NKLNEQSAVS 300 SVVKKDRESN LVTHGQLLDA SDSEGGGEVE TGPNRNDEDE PAAKRRNTEA RVEPVSSHRT 360 LTESRIIVQT TSEVDLLDDG YRWRKYGQKT VKGNPYPRSY YKCTTLGCNV RKHVERASTD 420 QKAVITTYEG KHNHDVPAGK ISSHGTANSN VPGLKSQNTA TEKDFCC

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MGDDEDKLPP SSVPSPLKSK AFPLRPTINL PPRTSMESLL SGGPGLGLGF SPGPMTLVSS  60
FFSDSDDCKS FSQLLAGAMT SPVAVPPTAS ELKDSAGLPD SPGLFSPDQG TFGLTHQQAL  120
AQVTLQAVEA YSHKQIQAHS VAGSAASSKL LTVFPSEKAK DQPVPLQFLN SAVVSKESSD  180
ISQSDQRLVS SSCNADRPAD DGYNWRKYGQ KQVKGSEFPR SYYKCTYPNC PVKKKVERSL  240
EGHITEIIYK GEHNHERPQP NKRAKDVGNS NGYSSVHGNT DLYSQIKSGL NKLNEQSAVS  300
SVVKKDRESN LVTHGQLLDA SDSEGGGEVE TGPNRNDEDE PAAKRRNTEA RVEPVSSHRT  360
LTESRIIVQT TSEVDLLDDG YRWRKYGQKT VKGNPYPRSY YKCTTLGCNV RKHVERASTD  420
QKAVITTYEG KHNHDVPAGK ISSHGTANSN VPGLKSQNTA TEKDFCC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-118	WRKY family protein