PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968545.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 516aa MW: 55456.1 Da PI: 6.2022

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.5	5.6e-09	331	379	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq XP_022968545.1 331 NSHSLAERVRREKISERMKFLQELVPGC----SKVTGKAVMLDEIINYVQSLQ 379 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MDVGGGDQFR VESSPQDCMS LDMAGCSSST AHVVDSFSST IWEQAANSQN LGLLEEHNIC 60 RTSNDIAISK TIGCPVPLST DSDRTLDISW SLSNSMLKGG GYLNAIPPSL SQLPADSSFI 120 ERAARFSWFS GGNFGDVIGH FDIPESMDVF SRGMGVVMPE RQEDVPRRNG LGSVSRAGGR 180 FQGNTVNSEA SKPVSLHNAA HGSLLKLDDC CKHAVDGSAN ESDEAEVSGG DGSGEPCTLE 240 VAGKEVSAEG LAAKKRKRIG QKAELDQVNG PLQRTSVAAK DNTESQLKGD QNPSSTANKG 300 TVKHGKQASQ PLDPPKEEYI HVRARRGQAT NSHSLAERVR REKISERMKF LQELVPGCSK 360 VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPRLDINI DELLEKDILQ PRAGSSSTLG 420 FSSHMPVACP PPQVSHRGLI PVSFPVIASS ETLRRSTISS QMTPRSGVFK EPTQIKNMWD 480 GELHNIVQMS FGMSTAPNGL AAEGSDSPGN TKVEQH

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MDVGGGDQFR VESSPQDCMS LDMAGCSSST AHVVDSFSST IWEQAANSQN LGLLEEHNIC  60
RTSNDIAISK TIGCPVPLST DSDRTLDISW SLSNSMLKGG GYLNAIPPSL SQLPADSSFI  120
ERAARFSWFS GGNFGDVIGH FDIPESMDVF SRGMGVVMPE RQEDVPRRNG LGSVSRAGGR  180
FQGNTVNSEA SKPVSLHNAA HGSLLKLDDC CKHAVDGSAN ESDEAEVSGG DGSGEPCTLE  240
VAGKEVSAEG LAAKKRKRIG QKAELDQVNG PLQRTSVAAK DNTESQLKGD QNPSSTANKG  300
TVKHGKQASQ PLDPPKEEYI HVRARRGQAT NSHSLAERVR REKISERMKF LQELVPGCSK  360
VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPRLDINI DELLEKDILQ PRAGSSSTLG  420
FSSHMPVACP PPQVSHRGLI PVSFPVIASS ETLRRSTISS QMTPRSGVFK EPTQIKNMWD  480
GELHNIVQMS FGMSTAPNGL AAEGSDSPGN TKVEQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-103	bHLH family protein