PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968004.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 282aa MW: 32390.4 Da PI: 8.8107

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.1	8.7e-25	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk+++ XP_022968004.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 119 79***************************************986 PP
2	QLQ	58.9	1.5e-20	8	43	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l++Ky++++ P+Pp+Ll+ i++ XP_022968004.1 8 PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR 43 8*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MCTRSMFPFT SAQWQELEHQ ALIFKYMVSG IPIPPDLLFS IKRSTLDSPF TSKLLPHHPQ 60 HVGWNYLQMS LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVDV 120 LKTTATNDIN RLSNPAFSSL TNNSSLLSYR PFPAHQISST SNGNGISPQD TNTLLLLESG 180 SYSDRNPDYS RDTYGLKEKV DEYAFFSQEP SETAARADSL QLTPLTMSCS SLYPKQNCSS 240 LQNDQSCYQL HQSLTDPLKQ QKREESQKTV HRFFDEWPPK EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-56	GRF family protein