PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022967880.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 272aa    MW: 30038.4 Da    PI: 8.4605
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022967880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.8e-05245266323
                     ETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                     Cp+C++ F ++  L+ Hi + H
  XP_022967880.1 245 CPKCSRGFIDPVALVEHIEKdH 266
                     ******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGTPEFPNLG KHCNLEDCKQ IDFLPFTCDC CRQVFCLEHR SYKRHSCPKT DRRDVTVVIC  60
PLCAKGVRLV PDQDPNITWE IHVNTECDPS NYEKVTKKKK CPVPGCRESL TFSNTIKCRD  120
CSVDHCLKHR FGLDHKCPGP KKPEPAGFPF VGVLSRSKQE ENGPKKALPT TASSNWTTAL  180
LNVASSFKAS WIATGNNSNG NGHVEQCPQC SAKFSLVLSL VEHIKKVHES GANRPGAKKV  240
VIDACPKCSR GFIDPVALVE HIEKDHGGTS RA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-119C2H2 family protein