PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967417.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 436aa MW: 48266.6 Da PI: 8.5643

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.1e-12	370	415	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ +k + +++L +AveYIk Lq XP_022967417.1 370 SIAERVRRTKISERMRKLQELVPNM----DKQTNTSDMLDLAVEYIKGLQ 415 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MEADFQQQQR ILHEHHQQQS QMSSGLTRYR SAPSSYFRRL TDREFCDQFF NRPSSPETEQ 60 IFAQFMTSGS AGDGGGGPVC SSQNLDESQK NAQTGEVFIT TEANQQTPYV NNETRAIHQQ 120 PSIVNSNFLP ASSTPSSYHQ NLMKPPLPNQ NLIPEAEGSG SMGVDLKPQI RTDGGRSSNL 180 IRQSSSPAGL FDYININASG YAALTGMGNS GTGSSFNEET SFSSPSRLKN FSPRALPPHS 240 SGLMSPMAGI EKKNIRETNQ DTKGFAGSQT SDYGSTSFPV GSWDESAVMS DNIVSRKALE 300 NDDDKEKYSN LNISDTKKVD PRNRPPMLAR HLTLPSTAAE MNAVEKILQF SDSVPCKLRA 360 KRGCATHPRS IAERVRRTKI SERMRKLQEL VPNMDKQTNT SDMLDLAVEY IKGLQKQVQT 420 LTDNRAKCKC SHRQHQ

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MEADFQQQQR ILHEHHQQQS QMSSGLTRYR SAPSSYFRRL TDREFCDQFF NRPSSPETEQ  60
IFAQFMTSGS AGDGGGGPVC SSQNLDESQK NAQTGEVFIT TEANQQTPYV NNETRAIHQQ  120
PSIVNSNFLP ASSTPSSYHQ NLMKPPLPNQ NLIPEAEGSG SMGVDLKPQI RTDGGRSSNL  180
IRQSSSPAGL FDYININASG YAALTGMGNS GTGSSFNEET SFSSPSRLKN FSPRALPPHS  240
SGLMSPMAGI EKKNIRETNQ DTKGFAGSQT SDYGSTSFPV GSWDESAVMS DNIVSRKALE  300
NDDDKEKYSN LNISDTKKVD PRNRPPMLAR HLTLPSTAAE MNAVEKILQF SDSVPCKLRA  360
KRGCATHPRS IAERVRRTKI SERMRKLQEL VPNMDKQTNT SDMLDLAVEY IKGLQKQVQT  420
LTDNRAKCKC SHRQHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	2e-65	bHLH family protein