PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966974.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YC

Protein Properties

Length: 298aa MW: 32818.5 Da PI: 4.8964

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	61.3	1.9e-19	6	86	18	98
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ++++P arikki++adedv +i+ +Pvl+ska elf+ +l r++ + + +t++ ++ +v++ +fdfl div r XP_022966974.1 6 DTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSFHLKHCVQSYSVFDFLRDIVSR 86 5789**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKALE LFLQDLCDRT YEITLQRGAK 60 TMNSFHLKHC VQSYSVFDFL RDIVSRVPDY GHGHSDGAVD DRKRRKPLGD EGNDIDELKK 120 IRMHDMSHGS TGRGRGRGRG RGRGRPARTA ERDNIPPNPE ADTCTSIENR NKSPNPDVQM 180 ENHVEPSKTS KEVSEEANQA IQNFDLNADV VNTSEDSNKT IAAAAAAAAA IIPEVPVEPT 240 GPTTTESEAK AAAAAAVAAD EFPAWPLSDV DKMAIDPLQY AHLSTRVDEE EEDYDEEE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	142	RGRGRGRGRG
2	133	143	RGRGRGRGRGR
3	135	144	RGRGRGRGRG
4	135	145	RGRGRGRGRGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	3e-68	NF-YC family protein